Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.7e-74 280.4 144 100.0
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.5e-32 143.3 145 51.0
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.0e-22 108.6 125 48.0
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.0e-17 94.0 158 39.2
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.6e-16 88.2 162 37.7
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.6e-16 87.4 163 36.2
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.1e-15 84.3 129 41.9
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.8e-14 83.2 137 40.1
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.2e-13 80.5 140 39.3
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 9.9e-13 77.4 141 34.8
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 1.7e-12 76.6 133 34.6
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 8.4e-12 74.3 137 33.6
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 1.4e-11 73.6 151 32.5
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 1.9e-11 73.2 137 32.8
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 2.4e-11 72.8 135 34.1
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 2.4e-11 72.8 139 32.4
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 3.2e-11 72.4 131 38.9
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 3.2e-11 72.4 135 34.1
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 3.2e-11 72.4 130 33.8
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 4.2e-11 72.0 154 33.8
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 4.2e-11 72.0 137 32.1
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.4e-11 71.6 137 32.8
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 7.1e-11 71.2 128 32.0
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 7.1e-11 71.2 131 31.3
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 7.1e-11 71.2 137 32.1
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.2e-10 70.5 141 31.2
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 1.2e-10 70.5 142 33.1
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.2e-10 70.5 127 33.9
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.6e-10 70.1 134 30.6
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.6e-10 70.1 138 35.5
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 2.1e-10 69.7 132 35.6
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.1e-10 69.7 137 32.1
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 3.5e-10 68.9 137 31.4
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 3.5e-10 68.9 128 31.2
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 3.5e-10 68.9 149 29.5
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 4.6e-10 68.6 129 34.1
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 4.6e-10 68.6 130 33.8
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 6.0e-10 68.2 140 32.1
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.0e-10 68.2 156 31.4
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.0e-10 68.2 134 30.6
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 7.9e-10 67.8 144 29.2
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 1.0e-09 67.4 126 31.0
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 1.8e-09 66.6 131 33.6
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 2.3e-09 66.2 126 31.7
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 2.3e-09 66.2 142 35.2
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 3.0e-09 65.9 138 33.3
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 3.0e-09 65.9 131 32.1
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 3.0e-09 65.9 142 31.0
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 3.0e-09 65.9 138 33.3
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 3.9e-09 65.5 127 34.6
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 3.9e-09 65.5 126 31.0
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 3.9e-09 65.5 126 31.0
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 3.9e-09 65.5 129 30.2
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 3.9e-09 65.5 127 33.1
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 3.9e-09 65.5 126 30.2
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 5.1e-09 65.1 126 31.0
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 5.1e-09 65.1 126 31.0
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 5.1e-09 65.1 142 32.4
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 5.1e-09 65.1 146 30.1
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 5.1e-09 65.1 136 30.9
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 6.7e-09 64.7 124 33.1
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 8.7e-09 64.3 123 30.9
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 8.7e-09 64.3 139 31.7
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.1e-08 63.9 136 36.8
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.1e-08 63.9 149 31.5
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.1e-08 63.9 149 31.5
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 1.5e-08 63.5 138 33.3
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 1.5e-08 63.5 139 30.9
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 1.5e-08 63.5 131 29.0
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.9e-08 63.2 131 31.3
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.9e-08 63.2 133 30.1
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.9e-08 63.2 138 31.2
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 1.9e-08 63.2 154 30.5
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 2.5e-08 62.8 139 30.9
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 3.3e-08 62.4 155 31.6
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 9.6e-08 60.8 140 32.9
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.3e-07 60.5 123 30.1
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.6e-07 60.1 132 30.3
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 1.6e-07 60.1 129 32.6
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.1e-07 59.7 144 33.3
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 2.1e-07 59.7 120 35.0
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 2.1e-07 59.7 128 28.1
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 2.8e-07 59.3 137 35.0
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 2.8e-07 59.3 148 31.8
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.7e-07 58.9 121 32.2
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 3.7e-07 58.9 146 29.5
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 4.8e-07 58.5 121 29.8
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 4.8e-07 58.5 121 29.8
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 4.8e-07 58.5 145 33.1
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 6.2e-07 58.2 144 32.6
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 6.2e-07 58.2 154 29.9
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 1.1e-06 57.4 134 35.1
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.4e-06 57.0 131 31.3
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 1.4e-06 57.0 116 31.0
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 1.4e-06 57.0 116 31.0
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 2.4e-06 56.2 127 29.1
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 3.1e-06 55.8 124 29.8
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.1e-06 55.8 135 31.1
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 4.0e-06 55.5 114 38.6
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.0e-06 55.5 150 28.7
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 4.0e-06 55.5 131 32.1
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 4.0e-06 55.5 122 32.0
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 5.3e-06 55.1 119 31.9
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 5.3e-06 55.1 152 31.6
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 5.3e-06 55.1 136 30.1
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 5.3e-06 55.1 127 32.3
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 5.3e-06 55.1 116 30.2
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 6.9e-06 54.7 148 31.1
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 9.0e-06 54.3 131 28.2
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 9.0e-06 54.3 123 31.7


User provided reference genes

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