Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.9e-178 629.0 307 100.0
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 7.1e-117 424.5 307 66.8
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.1e-114 417.2 309 65.4
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 5.8e-111 404.8 305 62.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 2.9e-110 402.5 306 61.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 5.4e-109 398.3 306 60.8
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 5.4e-109 398.3 306 60.8
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 7.1e-109 397.9 306 59.5
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.2e-108 397.1 306 60.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.2e-108 397.1 306 60.8
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.2e-108 397.1 304 59.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.6e-108 396.7 306 59.8
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 2.1e-108 396.4 306 59.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.7e-108 396.0 306 61.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 3.5e-108 395.6 305 60.7
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 6.0e-108 394.8 305 60.3
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 7.8e-108 394.4 306 59.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.0e-107 392.5 306 59.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.0e-107 392.5 306 59.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 5.1e-107 391.7 306 58.8
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 6.6e-107 391.3 306 59.8
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 6.6e-107 391.3 306 59.8
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.1e-106 390.6 306 59.8
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.1e-106 390.6 306 59.8
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.1e-106 390.6 306 59.8
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.5e-106 389.4 306 59.2
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.5e-106 389.4 306 59.8
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 4.3e-106 388.7 306 59.5
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.3e-106 388.7 306 59.5
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 7.3e-106 387.9 306 59.2
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 7.3e-106 387.9 306 59.8
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 7.3e-106 387.9 306 59.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 9.6e-106 387.5 306 59.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.2e-105 387.1 306 57.8
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.2e-105 387.1 306 59.5
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.6e-105 386.7 306 60.1
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.6e-105 386.7 305 59.3
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.6e-105 386.7 306 58.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 3.6e-105 385.6 305 59.3
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 4.7e-105 385.2 305 60.3
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 6.2e-105 384.8 306 58.8
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.1e-105 384.4 306 58.8
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 8.1e-105 384.4 306 57.2
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.1e-104 384.0 305 59.3
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.1e-104 384.0 306 57.5
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.4e-104 382.9 306 57.8
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 3.1e-104 382.5 306 58.5
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 3.1e-104 382.5 306 59.2
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 4.0e-104 382.1 305 57.7
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 4.0e-104 382.1 306 59.2
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 4.0e-104 382.1 306 57.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 6.8e-104 381.3 306 59.2
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 8.9e-104 380.9 306 58.2
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.5e-103 380.2 306 56.5
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 2.0e-103 379.8 306 58.5
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.6e-103 379.4 306 58.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 4.4e-103 378.6 306 58.8
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.8e-103 378.3 306 58.2
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 5.8e-103 378.3 306 59.2
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 9.9e-103 377.5 275 64.7
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.3e-102 377.1 305 57.7
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-102 376.7 306 58.2
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.7e-102 376.7 306 57.8
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 2.2e-102 376.3 289 61.9
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.4e-102 374.4 306 57.5
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.6e-100 370.2 322 55.6
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.6e-100 370.2 357 51.5
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.1e-100 369.8 306 55.9
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.1e-100 369.8 291 57.7
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 4.6e-100 368.6 306 56.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.0e-99 367.5 306 55.6
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.5e-98 362.8 275 59.6
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.1e-96 357.5 276 59.8
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.2e-95 354.0 369 49.1
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 5.8e-95 351.7 297 55.6
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.3e-94 350.5 370 47.0
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 2.2e-94 349.7 390 46.4
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.2e-93 345.9 275 58.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 4.2e-93 345.5 272 59.9
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.5e-92 342.4 274 58.4
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 3.9e-91 339.0 291 57.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.3e-89 334.0 306 53.6
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 3.6e-89 332.4 306 53.9
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.1e-88 329.3 299 53.2
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 3.5e-84 315.8 315 52.4
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.0e-83 312.8 237 65.4
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.9e-83 312.4 244 61.5
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.4e-77 293.9 306 47.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.8e-75 287.0 236 58.1
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 3.0e-67 259.6 310 49.4
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 9.1e-64 248.1 282 47.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.2e-62 243.4 248 51.2
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.9e-62 243.0 565 29.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 6.7e-59 231.9 186 56.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.8e-43 180.6 152 57.9
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 8.8e-43 178.3 129 61.2
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.7e-39 166.8 169 53.8
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.1e-24 118.2 253 32.4
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-22 110.5 96 49.0
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 6.8e-19 99.0 88 56.8
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.3e-14 84.0 69 52.2
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.1e-13 81.6 72 51.4


User provided reference genes

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