Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.3e-159 567.0 465 100.0
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 2.8e-40 170.6 193 47.2
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 9.9e-38 162.2 157 55.4
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.1e-36 158.7 214 43.5
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.3e-34 151.8 163 47.2
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 2.9e-29 134.0 204 40.7
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 2.9e-29 134.0 201 43.8
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 5.4e-28 129.8 192 42.2
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 5.4e-28 129.8 203 37.4
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 5.4e-28 129.8 195 40.5
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 9.3e-28 129.0 216 41.2
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.6e-27 128.3 209 40.7
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 2.7e-27 127.5 209 40.7
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 6.0e-27 126.3 197 39.6
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-26 125.6 198 39.4
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-26 125.6 198 39.4
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.0e-26 125.6 183 39.3
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 1.3e-26 125.2 208 38.5
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.8e-26 124.8 197 41.6
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.8e-26 124.8 200 41.0
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 2.3e-26 124.4 192 40.1
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.0e-26 124.0 191 39.8
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 6.7e-26 122.9 220 37.3
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.7e-26 122.9 207 39.6
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.7e-26 122.9 207 39.6
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 8.7e-26 122.5 197 41.1
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.1e-25 122.1 210 39.5
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 1.1e-25 122.1 206 38.3
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.5e-25 121.7 203 40.4
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 1.5e-25 121.7 178 42.7
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 1.5e-25 121.7 185 44.3
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.5e-25 121.7 185 44.3
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 1.9e-25 121.3 191 37.2
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 3.3e-25 120.6 196 38.3
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 4.3e-25 120.2 196 37.8
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 7.4e-25 119.4 208 41.3
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 7.4e-25 119.4 234 34.6
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 1.3e-24 118.6 183 42.1
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.6e-24 118.2 181 39.8
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.1e-24 117.9 190 40.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.1e-24 117.9 215 35.8
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 3.6e-24 117.1 210 37.6
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 3.6e-24 117.1 202 37.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 4.8e-24 116.7 191 41.9
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 4.8e-24 116.7 126 50.0
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 8.1e-24 115.9 180 40.6
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 8.1e-24 115.9 189 40.2
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.1e-23 115.5 181 40.9
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 1.4e-23 115.2 195 38.5
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.4e-23 115.2 159 42.8
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 1.8e-23 114.8 198 37.9
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 2.4e-23 114.4 190 40.0
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 2.4e-23 114.4 182 39.0
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 3.1e-23 114.0 210 35.7
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 4.0e-23 113.6 187 38.5
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 5.3e-23 113.2 135 46.7
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 9.0e-23 112.5 125 48.0
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 9.0e-23 112.5 196 38.3
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 2.0e-22 111.3 175 38.9
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 2.0e-22 111.3 175 40.6
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 2.0e-22 111.3 205 37.1
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.6e-22 110.9 206 36.9
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 3.4e-22 110.5 137 41.6
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 3.4e-22 110.5 193 37.8
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 4.5e-22 110.2 193 37.8
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 4.5e-22 110.2 147 42.9
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 5.8e-22 109.8 194 38.1
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 7.6e-22 109.4 185 39.5
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 7.6e-22 109.4 212 36.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 9.9e-22 109.0 196 38.8
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 9.9e-22 109.0 135 45.9
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.3e-21 108.6 186 38.2
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 2.9e-21 107.5 222 33.3
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 8.4e-21 105.9 134 45.5
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 1.1e-20 105.5 197 35.5
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 2.4e-20 104.4 125 43.2
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 4.2e-20 103.6 219 34.7
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 4.2e-20 103.6 175 37.1
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.2e-19 102.1 182 38.5
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-19 102.1 113 48.7
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 2.7e-19 100.9 180 36.1
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 4.6e-19 100.1 206 35.4
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 7.9e-19 99.4 176 35.8
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.0e-18 99.0 232 32.3
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.0e-18 99.0 187 35.3
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 2.3e-18 97.8 188 35.1
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 2.3e-18 97.8 221 36.2
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 3.0e-18 97.4 186 39.2
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 3.0e-18 97.4 187 35.3
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 3.0e-18 97.4 185 34.6
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 5.1e-18 96.7 187 34.8
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 5.1e-18 96.7 187 34.8
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 5.1e-18 96.7 188 35.1
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 6.7e-18 96.3 234 32.9
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 6.7e-18 96.3 166 38.0
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 8.7e-18 95.9 221 34.8
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 1.5e-17 95.1 188 35.1
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.9e-17 94.7 188 33.5
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 1.6e-16 91.7 174 38.5
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.6e-16 91.7 181 33.1
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 5.3e-15 86.7 216 32.4
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 1.5e-14 85.1 145 40.7
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 5.8e-14 83.2 90 45.6
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 6.5e-13 79.7 229 29.7
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 2.5e-12 77.8 155 35.5
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 5.5e-12 76.6 158 37.3
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 1.6e-11 75.1 156 33.3
MCO07G107 Micromonas commoda HOM05D006369 ORTHO05D007764 7.4e-09 66.2 89 39.3
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 7.6e-06 56.2 53 45.3


User provided reference genes

Program Settings