Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0084s0020 Marchantia polymorpha HOM05D004696 ORTHO05D005645 4.7e-103 377.9 189 100.0
Pp3c7_450 Physcomitrium patens HOM05D004696 ORTHO05D005645 2.1e-55 219.5 187 58.8
MBI03_g01483_MAGBIO Magnolia biondii HOM05D004696 ORTHO05D005645 8.1e-47 191.0 177 54.8
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 1.2e-45 187.2 191 51.3
SMO139G0013 Selaginella moellendorffii HOM05D004696 ORTHO05D005645 1.2e-45 187.2 181 52.5
Sed0019137 Sechium edule HOM05D004696 ORTHO05D005645 4.4e-45 185.3 173 52.6
Sabra02G0114900 Salix brachista HOM05D004696 ORTHO05D005645 6.4e-44 181.4 178 53.9
CsaV3_6G008150 Cucumis sativus L. HOM05D004696 ORTHO05D005645 1.1e-43 180.6 173 53.2
Lsat_1_v5_gn_6_92581 Lactuca sativa HOM05D004696 ORTHO05D005645 1.1e-43 180.6 185 53.0
Thecc.04G312600 Theobroma cacao HOM05D004696 ORTHO05D005645 1.4e-43 180.3 180 50.6
Cpa.g.sc146.25 Carica papaya HOM05D004696 ORTHO05D005645 1.9e-43 179.9 175 52.0
TAR629G2307 Trochodendron aralioides HOM05D004696 ORTHO05D005645 1.9e-43 179.9 174 54.0
Manes.03G211700 Manihot esculenta HOM05D004696 ORTHO05D005645 2.4e-43 179.5 175 52.6
Atru.chr4.3144 Acer truncatum HOM05D004696 ORTHO05D005645 4.2e-43 178.7 172 51.7
HanXRQChr09g0238571 Helianthus annuus HOM05D004696 ORTHO05D005645 4.2e-43 178.7 188 52.1
PGR031G3538 Punica granatum HOM05D004696 ORTHO05D005645 4.2e-43 178.7 183 50.8
Eucgr.B03956 Eucalyptus grandis HOM05D004696 ORTHO05D005645 5.4e-43 178.3 184 51.1
Os02g0730500 Oryza sativa ssp. japonica HOM05D004696 ORTHO05D005645 7.1e-43 177.9 177 50.8
Manes.11G020900 Manihot esculenta HOM05D004696 ORTHO05D005645 9.2e-43 177.6 176 52.3
Potri.008G206400 Populus trichocarpa HOM05D004696 ORTHO05D005645 9.2e-43 177.6 174 51.7
Ah.06g192450 Amaranthus hybridus HOM05D004696 ORTHO05D005645 1.2e-42 177.2 174 52.3
Phvul.003G045400 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 1.2e-42 177.2 180 50.6
CiPaw.02G069300 Carya illinoinensis HOM05D004696 ORTHO05D005645 1.6e-42 176.8 175 50.3
Sc17g0002920 Simmondsia chinensis HOM05D004696 ORTHO05D005645 2.1e-42 176.4 177 53.1
VMungo0331G1167 Vigna mungo HOM05D004696 ORTHO05D005645 2.1e-42 176.4 176 51.1
AUR62020507 Chenopodium quinoa HOM05D004696 ORTHO05D005645 2.7e-42 176.0 146 60.3
CSS0007787 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 3.5e-42 175.6 180 51.7
Cfa015727 Carpinus fangiana HOM05D004696 ORTHO05D005645 3.5e-42 175.6 177 51.4
Lsat_1_v5_gn_1_39920 Lactuca sativa HOM05D004696 ORTHO05D005645 3.5e-42 175.6 186 51.6
PSO478G3068 Papaver somniferum HOM05D004696 ORTHO05D005645 3.5e-42 175.6 190 51.1
Potri.010G002100 Populus trichocarpa HOM05D004696 ORTHO05D005645 3.5e-42 175.6 185 50.8
CANSAT78G0332 Cannabis sativa HOM05D004696 ORTHO05D005645 4.6e-42 175.3 179 50.3
MD13G1140700 Malus domestica HOM05D004696 ORTHO05D005645 4.6e-42 175.3 179 50.8
PSO782G4648 Papaver somniferum HOM05D004696 ORTHO05D005645 4.6e-42 175.3 190 50.5
ECA220G0002 Erigeron canadensis HOM05D004696 ORTHO05D005645 6.0e-42 174.9 174 52.9
Lalb_Chr10g0096421 Lupinus albus HOM05D004696 ORTHO05D005645 7.8e-42 174.5 192 48.4
Phvul.010G140500 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 7.8e-42 174.5 179 50.3
Migut.N00002 Erythranthe guttata HOM05D004696 ORTHO05D005645 1.0e-41 174.1 182 48.4
GSVIVG01017685001 Vitis vinifera HOM05D004696 ORTHO05D005645 1.0e-41 174.1 180 50.6
Duzib151G0078 Durio zibethinus HOM05D004696 ORTHO05D005645 1.3e-41 173.7 176 51.1
Gorai.005G071900 Gossypium raimondii HOM05D004696 ORTHO05D005645 1.3e-41 173.7 184 48.9
Lalb_Chr17g0338851 Lupinus albus HOM05D004696 ORTHO05D005645 1.3e-41 173.7 176 48.9
Haze_00771 Corylus avellana HOM05D004696 ORTHO05D005645 1.7e-41 173.3 177 50.3
Sabra02G0116500 Salix brachista HOM05D004696 ORTHO05D005645 1.7e-41 173.3 203 48.3
Ciclev10005920m.g Citrus clementina HOM05D004696 ORTHO05D005645 2.3e-41 172.9 182 48.9
Gohir.A02G058200 Gossypium hirsutum HOM05D004696 ORTHO05D005645 2.3e-41 172.9 184 48.9
MD16G1136700 Malus domestica HOM05D004696 ORTHO05D005645 2.3e-41 172.9 180 50.6
Gohir.D02G064000 Gossypium hirsutum HOM05D004696 ORTHO05D005645 3.0e-41 172.6 184 48.4
AUR62015697 Chenopodium quinoa HOM05D004696 ORTHO05D005645 3.9e-41 172.2 139 61.9
Lj2g0021207 Lotus japonicus HOM05D004696 ORTHO05D005645 3.9e-41 172.2 181 49.2
MD07G1065600 Malus domestica HOM05D004696 ORTHO05D005645 3.9e-41 172.2 179 50.8
Ah.16g105210 Amaranthus hybridus HOM05D004696 ORTHO05D005645 5.1e-41 171.8 174 51.1
Actinidia22921 Actinidia chinensis HOM05D004696 ORTHO05D005645 8.7e-41 171.0 185 48.6
Sabra08G0150400 Salix brachista HOM05D004696 ORTHO05D005645 1.1e-40 170.6 198 48.5
Dinv29511 Davidia involucrata HOM05D004696 ORTHO05D005645 1.5e-40 170.2 174 50.6
unitig_8.g2889 Utricularia gibba HOM05D004696 ORTHO05D005645 1.5e-40 170.2 177 52.0
Glyma.11G024900 Glycine max HOM05D004696 ORTHO05D005645 1.9e-40 169.9 178 51.1
Psat7g133720 Pisum sativum HOM05D004696 ORTHO05D005645 2.5e-40 169.5 180 49.4
SEGI_16783 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 2.5e-40 169.5 151 55.6
TWI73G0566 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 3.3e-40 169.1 173 50.3
Psat1g042400 Pisum sativum HOM05D004696 ORTHO05D005645 4.3e-40 168.7 175 50.9
SEGI_41631 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 4.3e-40 168.7 144 57.6
Solyc05g053220.3 Solanum lycopersicum HOM05D004696 ORTHO05D005645 4.3e-40 168.7 177 49.7
Sopen05g031730 Solanum pennellii HOM05D004696 ORTHO05D005645 4.3e-40 168.7 177 49.7
arahy.Tifrunner.gnm1.ann1.NQRV37 Arachis hypogaea HOM05D004696 ORTHO05D005645 5.6e-40 168.3 183 50.3
TWI09G0971 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 5.6e-40 168.3 173 49.7
Zm00001eb189970 Zea mays HOM05D004696 ORTHO05D005645 5.6e-40 168.3 182 48.9
Glyma.01G218300 Glycine max HOM05D004696 ORTHO05D005645 9.6e-40 167.5 181 50.3
RcHm_v2.0_Chr4g0427441 Rosa chinensis HOM05D004696 ORTHO05D005645 9.6e-40 167.5 176 47.2
MSTRG.24614 Avicennia marina HOM05D004696 ORTHO05D005645 1.6e-39 166.8 179 49.2
Dinv18020 Davidia involucrata HOM05D004696 ORTHO05D005645 1.6e-39 166.8 186 49.5
FAN07G1680 Fragaria x ananassa HOM05D004696 ORTHO05D005645 1.6e-39 166.8 176 47.7
Oeu022705.1 Olea europaea HOM05D004696 ORTHO05D005645 2.1e-39 166.4 161 54.0
Glyma.14G125600 Glycine max HOM05D004696 ORTHO05D005645 2.8e-39 166.0 179 50.3
Medtr5g081850 Medicago truncatula HOM05D004696 ORTHO05D005645 2.8e-39 166.0 184 47.8
PGSC0003DMG400027150 Solanum tuberosum HOM05D004696 ORTHO05D005645 2.8e-39 166.0 177 48.6
FvH4_4g21490 Fragaria vesca HOM05D004696 ORTHO05D005645 3.6e-39 165.6 176 47.7
QL06p014174 Quercus lobata HOM05D004696 ORTHO05D005645 3.6e-39 165.6 187 48.7
arahy.Tifrunner.gnm1.ann1.61U0KE Arachis hypogaea HOM05D004696 ORTHO05D005645 4.7e-39 165.2 183 48.6
Prupe.1G105700 Prunus persica HOM05D004696 ORTHO05D005645 4.7e-39 165.2 185 47.6
CAN.G305.38 Capsicum annuum HOM05D004696 ORTHO05D005645 6.2e-39 164.9 177 48.0
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 8.1e-39 164.5 182 48.9
THA.LOC104827108 Tarenaya hassleriana HOM05D004696 ORTHO05D005645 1.4e-38 163.7 150 54.7
arahy.Tifrunner.gnm1.ann1.BY2PXQ Arachis hypogaea HOM05D004696 ORTHO05D005645 1.8e-38 163.3 183 48.6
EL10Ac4g08571 Beta vulgaris HOM05D004696 ORTHO05D005645 1.8e-38 163.3 184 50.5
Cc03_g00150 Coffea canephora HOM05D004696 ORTHO05D005645 2.4e-38 162.9 205 46.3
PSO063G5897 Papaver somniferum HOM05D004696 ORTHO05D005645 2.4e-38 162.9 185 49.7
vmacro08011 Vaccinium macrocarpon HOM05D004696 ORTHO05D005645 2.4e-38 162.9 187 49.2
Aqoxy5G04183 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 3.1e-38 162.5 179 46.4
FAN12G0616 Fragaria x ananassa HOM05D004696 ORTHO05D005645 3.1e-38 162.5 176 47.2
Lj4g0004970 Lotus japonicus HOM05D004696 ORTHO05D005645 3.1e-38 162.5 180 48.9
PSO832G1751 Papaver somniferum HOM05D004696 ORTHO05D005645 5.3e-38 161.8 188 49.5
CARHR185500 Cardamine hirsuta HOM05D004696 ORTHO05D005645 6.9e-38 161.4 180 48.9
Aqoxy4G02417 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 2.6e-37 159.5 179 47.5
Cc00_g15640 Coffea canephora HOM05D004696 ORTHO05D005645 3.4e-37 159.1 157 52.9
TPR.G8061 Trifolium pratense HOM05D004696 ORTHO05D005645 3.4e-37 159.1 176 46.6
BcaB04g19639 Brassica carinata HOM05D004696 ORTHO05D005645 5.8e-37 158.3 182 47.8
Carub.0002s0865 Capsella rubella HOM05D004696 ORTHO05D005645 5.8e-37 158.3 181 48.6
SGA_v2.0_scaffold49G18399 Striga asiatica HOM05D004696 ORTHO05D005645 7.6e-37 157.9 182 48.4
AL6G41010 Arabidopsis lyrata HOM05D004696 ORTHO05D005645 1.7e-36 156.8 185 49.2
AagrBONN_evm.TU.Sc2ySwM_368.1627 Anthoceros agrestis HOM05D004696 ORTHO05D005645 2.9e-36 156.0 182 47.8
AT5G30495 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 2.9e-36 156.0 180 50.0
BcaC04g23715 Brassica carinata HOM05D004696 ORTHO05D005645 2.9e-36 156.0 174 44.8
CBR_g41139 Chara braunii HOM05D004696 ORTHO05D005645 2.9e-36 156.0 151 51.7
Sp2g19960 Schrenkiella parvula HOM05D004696 ORTHO05D005645 1.9e-35 153.3 185 45.9
Aqoxy3G02973 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 3.2e-35 152.5 141 53.9
SHI04008 Sapria himalayana HOM05D004696 ORTHO05D005645 5.4e-35 151.8 150 52.0
Thhalv10005420m.g Eutrema salsugineum HOM05D004696 ORTHO05D005645 1.0e-33 147.5 186 45.2
BraA09t36143Z Brassica rapa HOM05D004696 ORTHO05D005645 3.9e-33 145.6 174 43.7
C09p05450 Brassica napus HOM05D004696 ORTHO05D005645 5.1e-33 145.2 174 43.1
A09p05040 Brassica napus HOM05D004696 ORTHO05D005645 6.6e-33 144.8 174 43.7
BolC9t53474H Brassica oleracea HOM05D004696 ORTHO05D005645 1.5e-32 143.7 174 42.5
Aa31LG2G12130 Aethionema arabicum HOM05D004696 ORTHO05D005645 1.9e-32 143.3 178 45.5
AT1G54770 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 1.9e-32 143.3 179 46.9
ECA248G3148 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.6e-31 140.2 177 45.8
Nitab4.5_0008086g0030 Nicotiana tabacum HOM05D004696 ORTHO05D005645 1.2e-29 134.0 170 45.3
MCO05G434 Micromonas commoda HOM05D004696 ORTHO05D005645 2.6e-29 132.9 151 45.7
Oeu037627.2 Olea europaea HOM05D004696 ORTHO05D005645 2.2e-28 129.8 279 32.6
Lj6C700T16 Lonicera japonica HOM05D004696 ORTHO05D005645 4.9e-28 128.6 173 43.4
ClCG06G002080 Citrullus lanatus HOM05D004696 ORTHO05D005645 6.4e-28 128.3 171 42.7
arahy.Tifrunner.gnm1.ann1.09FGJA Arachis hypogaea HOM05D004696 ORTHO05D005645 8.4e-28 127.9 172 43.0
SGA_v2.0_scaffold69G23291 Striga asiatica HOM05D004696 ORTHO05D005645 3.2e-27 125.9 176 41.5
Hma1.2p1_2234F.1_g317690 Hydrangea macrophylla HOM05D004696 ORTHO05D000003 5.4e-27 125.2 248 34.7
Peaxi162Scf00164g00414 Petunia axillaris HOM05D004696 ORTHO05D005645 5.4e-27 125.2 171 42.1
Ca_05928_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 9.3e-27 124.4 173 41.0
Ca_06214_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 9.3e-27 124.4 175 41.1
Rhsim04G0248200 Rhododendron simsii HOM05D004696 ORTHO05D005645 7.9e-26 121.3 185 40.5
ATR1127G170 Amborella trichopoda HOM05D004696 ORTHO05D005645 1.9e-24 116.7 115 49.6
MELO3C035238.2 Cucumis melo HOM05D004696 ORTHO05D005645 1.6e-23 113.6 150 42.0
Nn3g16891 Nelumbo nucifera HOM05D004696 ORTHO05D005645 1.6e-23 113.6 122 46.7
Cfa024688 Carpinus fangiana HOM05D004696 ORTHO05D005645 3.7e-23 112.5 129 46.5
Actinidia01063 Actinidia chinensis HOM05D004696 ORTHO05D005645 8.1e-23 111.3 184 38.6
PRCOL_00000839 Prasinoderma coloniale HOM05D004696 ORTHO05D005645 2.4e-22 109.8 161 39.1
ECA149G0001 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.2e-21 107.5 97 57.7
HPP92_006011 Vanilla planifolia HOM05D004696 ORTHO05D005645 3.4e-21 105.9 116 46.6
Lj4g0014561 Lotus japonicus HOM05D004696 ORTHO05D005645 4.9e-20 102.1 87 58.6
Lj4g0016234 Lotus japonicus HOM05D004696 ORTHO05D005645 1.9e-19 100.1 96 56.2
Zm00001eb253530 Zea mays HOM05D004696 ORTHO05D005645 2.5e-19 99.8 89 57.3
Nitab4.5_0000745g0120 Nicotiana tabacum HOM05D004696 ORTHO05D005645 7.1e-19 98.2 170 37.1
Cre03.g194150 Chlamydomonas reinhardtii HOM05D004696 ORTHO05D005645 2.7e-18 96.3 146 38.4
Lj2g0009432 Lotus japonicus HOM05D004696 ORTHO05D005645 7.4e-16 88.2 75 58.7
Lj2g0010517 Lotus japonicus HOM05D004696 ORTHO05D005645 1.6e-15 87.0 134 41.8
BolC9t57816H Brassica oleracea HOM05D004696 ORTHO05D005645 1.1e-14 84.3 95 48.4
BcaC04g19932 Brassica carinata HOM05D004696 ORTHO05D005645 3.4e-13 79.3 95 48.4
Zm00001eb026470 Zea mays HOM05D004696 ORTHO05D021106 3.4e-13 79.3 63 58.7
COL.COLO4_34519 Corchorus olitorius HOM05D004696 ORTHO05D005645 1.7e-12 77.0 103 40.8
RcHm_v2.0_Chr4g0427481 Rosa chinensis HOM05D004696 ORTHO05D005645 1.7e-12 77.0 96 39.6
Zm00001eb219180 Zea mays HOM05D004696 ORTHO05D005645 7.1e-11 71.6 63 54.0
CSS0022818 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 1.0e-09 67.8 94 40.4
Aqoxy5G04095 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 3.9e-09 65.9 55 54.5
CSS0046364 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 6.7e-09 65.1 95 40.0
TAR371G0358 Trochodendron aralioides HOM05D004696 ORTHO05D005645 6.7e-09 65.1 90 45.6
EL10Ac1g01076 Beta vulgaris HOM05D004696 ORTHO05D005645 5.3e-06 55.5 51 52.9


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