Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 0.0e+00 1367.1 796 100.0
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 8.5e-223 777.7 825 58.3
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 4.4e-187 659.1 825 48.1
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 3.7e-186 656.0 816 50.9
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.4e-185 654.1 818 49.6
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.3e-183 646.7 805 49.6
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 3.9e-183 646.0 827 48.0
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.5e-182 644.0 803 49.1
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.3e-182 642.9 805 50.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 3.6e-181 639.4 814 48.3
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 4.7e-181 639.0 818 49.6
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 5.2e-180 635.6 694 57.9
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.5e-179 634.0 827 48.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 4.4e-179 632.5 799 49.7
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 5.8e-179 632.1 772 50.6
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.7e-178 630.6 823 48.0
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.7e-178 630.6 830 47.5
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 2.9e-178 629.8 735 50.6
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.4e-178 628.6 800 47.6
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.4e-177 626.7 819 49.6
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 3.2e-177 626.3 827 48.1
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.1e-177 625.9 818 47.4
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 7.1e-177 625.2 816 48.3
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.6e-176 624.0 835 46.9
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 6.0e-176 622.1 838 48.0
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 7.8e-176 621.7 819 48.6
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.3e-175 620.9 819 48.7
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.3e-175 620.9 813 47.4
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.7e-175 620.5 816 48.9
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.7e-175 620.5 819 49.7
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 5.1e-175 619.0 793 46.5
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 5.1e-175 619.0 805 47.3
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 3.3e-174 616.3 798 48.0
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 7.3e-174 615.1 825 47.0
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.2e-173 614.4 805 45.1
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.6e-173 614.0 851 45.4
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.8e-172 610.5 792 46.6
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.4e-172 610.1 857 46.8
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 5.2e-172 609.0 816 49.0
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 5.2e-172 609.0 822 47.7
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 6.8e-172 608.6 848 46.9
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.2e-171 607.8 846 45.4
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-171 607.4 808 45.5
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 2.0e-171 607.1 795 46.8
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 4.4e-171 605.9 798 48.0
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.3e-170 604.4 828 47.1
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.7e-170 604.0 816 46.4
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 2.9e-170 603.2 828 47.3
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.4e-170 602.1 815 46.0
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 8.4e-170 601.7 825 47.4
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.4e-169 600.1 810 49.6
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.9e-166 590.5 802 48.3
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 2.5e-166 590.1 792 44.2
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 4.3e-166 589.3 836 42.6
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 7.3e-166 588.6 819 46.0
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 9.6e-166 588.2 814 47.9
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 3.6e-165 586.3 821 46.7
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.7e-165 585.9 791 45.3
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 8.1e-165 585.1 825 46.4
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.1e-164 584.7 818 45.5
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 9.0e-164 581.6 795 45.9
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 5.8e-163 578.9 796 47.9
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 7.6e-163 578.6 815 43.9
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.3e-162 577.8 821 44.9
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.7e-162 577.4 792 45.2
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 2.2e-162 577.0 820 46.2
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.9e-162 575.9 791 44.6
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 8.4e-162 575.1 807 46.0
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.1e-161 574.7 766 48.0
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 2.4e-161 573.5 813 47.0
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 5.4e-161 572.4 797 46.2
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 5.4e-161 572.4 851 43.7
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.2e-160 571.2 806 46.9
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.6e-160 570.9 851 44.4
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.6e-160 570.9 791 47.0
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 4.6e-160 569.3 812 43.6
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 1.5e-158 564.3 832 45.7
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.3e-158 563.1 895 43.0
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.3e-157 561.2 814 44.5
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 4.8e-157 559.3 836 43.7
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 1.5e-155 554.3 803 43.5
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.6e-155 553.5 794 43.2
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 7.6e-155 552.0 798 45.5
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 4.9e-154 549.3 800 44.6
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.4e-153 547.7 802 44.1
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 2.3e-151 540.4 830 43.9
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 7.4e-150 535.4 885 44.9
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-148 531.6 837 44.6
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.9e-148 528.9 795 43.0
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 2.6e-147 526.9 820 44.6
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.7e-146 524.2 751 47.5
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.4e-145 521.2 819 48.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 3.2e-145 520.0 838 42.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 7.1e-145 518.8 819 48.1
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.0e-143 515.0 654 50.2
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.9e-142 510.8 789 42.6
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.4e-142 508.8 816 45.2
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.5e-139 499.6 781 42.3
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.2e-137 493.4 831 41.2
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 3.9e-135 486.5 744 43.5
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 6.7e-135 485.7 511 52.6
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.3e-134 483.4 828 37.4
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 5.7e-134 482.6 816 42.9
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 1.1e-132 478.4 821 41.2
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.2e-131 474.9 802 42.9
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 5.9e-131 472.6 823 41.2
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 6.5e-130 469.2 807 41.8
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.0e-127 461.8 808 40.3
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 3.1e-124 450.3 946 37.0
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.6e-120 438.0 583 49.1
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.0e-119 435.3 787 36.8
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.0e-119 433.7 750 39.1
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 3.0e-119 433.7 787 36.8
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.9e-119 433.3 787 37.0
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 4.4e-118 429.9 516 48.4
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 5.9e-115 419.5 434 51.6
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.1e-112 411.0 840 34.0
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 3.9e-111 406.8 818 41.7
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 2.2e-109 401.0 651 42.2
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 2.0e-107 394.4 783 39.0
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 6.5e-106 389.4 892 36.9
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 4.4e-102 376.7 562 47.3
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 2.1e-96 357.8 544 46.9
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 3.5e-91 340.5 468 47.6
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.9e-90 337.4 469 45.6
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.8e-85 320.9 837 33.3
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 6.6e-74 283.1 307 51.1
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.5e-73 281.2 448 43.3
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.1e-68 265.8 533 35.8
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 2.7e-67 261.2 341 43.4
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 8.9e-63 246.1 508 37.2
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 8.9e-63 246.1 525 33.5
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 5.8e-62 243.4 808 30.1
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.7e-56 223.8 271 47.2
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 8.4e-53 213.0 453 32.2
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 3.2e-52 211.1 449 34.7
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 8.1e-48 196.4 222 50.5
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.5e-43 181.0 359 37.3
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.6e-35 154.1 391 40.9
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-28 132.9 380 30.0
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 5.5e-28 130.6 148 50.0
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-22 112.1 314 31.2
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-21 109.4 335 29.6
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 8.4e-21 106.7 121 52.9
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-18 99.8 128 42.2
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.1e-15 87.8 126 43.7
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-14 85.9 86 57.0
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 6.5e-13 80.5 107 43.9
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.6e-11 74.3 86 51.2
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 1.0e-10 73.2 132 34.1
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-10 72.8 285 29.1
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.8e-10 70.1 79 50.6
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.3e-09 68.2 81 40.7
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.3e-09 68.2 76 43.4
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.3e-09 68.2 244 27.5
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.3e-09 68.2 76 43.4
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 7.4e-09 67.0 82 46.3
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-08 66.2 345 24.9
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.3e-08 63.9 285 24.9
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 1.1e-07 63.2 71 53.5
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-07 62.4 114 32.5
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.1e-07 61.6 80 38.8
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.2e-06 59.7 41 63.4


User provided reference genes

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