Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 6.1e-76 287.3 139 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.7e-33 146.4 145 53.1
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 7.1e-32 141.0 112 57.1
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.2e-31 140.2 110 54.5
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 1.2e-31 140.2 111 55.9
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.2e-31 140.2 114 53.5
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 6.0e-31 137.9 115 51.3
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 6.0e-31 137.9 114 53.5
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.3e-30 136.7 113 54.0
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.3e-30 136.7 114 50.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 2.3e-30 136.0 114 51.8
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 3.0e-30 135.6 110 53.6
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 6.6e-30 134.4 111 54.1
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 6.6e-30 134.4 110 51.8
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 8.6e-30 134.0 110 52.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 8.6e-30 134.0 110 52.7
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.1e-29 133.7 111 54.1
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.1e-29 133.7 110 54.5
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.1e-29 133.7 115 50.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.5e-29 133.3 114 48.2
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.5e-29 133.3 114 49.1
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 2.5e-29 132.5 113 51.3
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.5e-29 132.5 110 53.6
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 3.3e-29 132.1 113 51.3
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 4.3e-29 131.7 114 49.1
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 4.3e-29 131.7 110 52.7
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 4.3e-29 131.7 110 51.8
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.3e-29 131.7 109 52.3
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 7.3e-29 131.0 110 51.8
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 7.3e-29 131.0 111 51.4
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 9.5e-29 130.6 110 51.8
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 9.5e-29 130.6 110 52.7
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.6e-28 129.8 110 51.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 1.6e-28 129.8 110 51.8
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.8e-28 129.0 111 51.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 2.8e-28 129.0 110 51.8
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.8e-28 129.0 118 48.3
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 3.6e-28 128.6 110 51.8
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 3.6e-28 128.6 114 48.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.6e-28 128.6 114 47.4
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 3.6e-28 128.6 110 50.9
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 4.7e-28 128.3 114 50.9
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 4.7e-28 128.3 109 51.4
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 6.2e-28 127.9 113 49.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.2e-28 127.9 114 51.8
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 8.1e-28 127.5 111 50.5
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 8.1e-28 127.5 113 47.8
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 8.1e-28 127.5 110 47.3
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 8.1e-28 127.5 118 49.2
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.1e-27 127.1 114 50.0
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.4e-27 126.7 113 48.7
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 2.3e-27 125.9 111 46.8
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.3e-27 125.9 106 50.9
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 2.3e-27 125.9 110 50.0
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.1e-27 125.6 114 50.9
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 4.0e-27 125.2 110 51.8
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 4.0e-27 125.2 114 49.1
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 5.2e-27 124.8 110 50.0
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 5.2e-27 124.8 111 45.0
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 5.2e-27 124.8 102 53.9
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 2.0e-26 122.9 102 52.9
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 2.6e-26 122.5 110 48.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.4e-26 122.1 114 44.7
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.4e-26 122.1 114 44.7
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.4e-26 122.1 114 44.7
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 5.8e-26 121.3 110 47.3
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 7.6e-26 120.9 110 47.3
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 9.9e-26 120.6 110 48.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.3e-25 120.2 110 47.3
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.7e-25 119.8 110 47.3
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.9e-25 119.0 105 50.5
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 2.9e-25 119.0 101 51.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 4.9e-25 118.2 111 45.0
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 6.4e-25 117.9 110 46.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 8.4e-25 117.5 103 49.5
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 8.4e-25 117.5 103 49.5
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.4e-24 116.7 110 46.4
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 3.2e-24 115.5 105 49.5
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 3.2e-24 115.5 124 46.0
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 9.2e-24 114.0 84 53.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 1.6e-23 113.2 109 45.9
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 4.6e-23 111.7 116 44.0
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.0e-22 110.5 97 47.4
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 3.0e-22 109.0 162 36.4
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 8.6e-22 107.5 89 49.4
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.5e-21 106.7 101 47.5
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.4e-19 100.1 104 47.1
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.4e-19 99.4 79 46.8
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 8.9e-19 97.4 118 38.1
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.2e-18 97.1 82 45.1
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 7.1e-16 87.8 107 36.4
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 9.3e-16 87.4 110 40.0
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.5e-13 80.1 64 54.7
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 5.3e-11 71.6 80 40.0
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.7e-09 66.6 110 36.4
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.2e-07 60.5 114 33.3
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 6.0e-07 58.2 56 42.9
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 7.9e-07 57.8 45 53.3
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 3.0e-06 55.8 53 41.5


User provided reference genes

Program Settings