Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.6e-166 589.3 289 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 6.2e-115 417.9 268 74.3
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 6.0e-110 401.4 265 71.7
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 9.6e-108 394.0 267 71.2
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.1e-98 364.0 264 64.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 4.0e-98 362.1 266 64.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.5e-97 360.1 264 63.6
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 3.4e-97 359.0 264 64.8
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 7.6e-97 357.8 269 63.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.2e-96 356.3 266 62.8
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.2e-96 356.3 264 64.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 3.8e-96 355.5 264 64.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 3.8e-96 355.5 264 64.8
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 8.4e-96 354.4 264 62.9
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 2.5e-95 352.8 266 61.3
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 7.1e-95 351.3 266 60.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 9.3e-95 350.9 264 63.3
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 2.1e-94 349.7 266 61.7
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 3.5e-94 349.0 266 60.5
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 4.6e-94 348.6 266 62.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 6.0e-94 348.2 264 62.5
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 7.9e-94 347.8 266 61.3
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.0e-93 347.4 264 60.6
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.0e-93 347.4 267 61.8
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.0e-93 347.4 266 62.0
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.8e-93 346.7 268 61.9
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.3e-93 346.3 264 61.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.1e-93 345.1 264 62.1
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.1e-93 345.1 264 62.5
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 8.7e-93 344.4 266 60.9
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.1e-92 344.0 266 61.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.1e-92 344.0 266 60.5
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.5e-92 343.6 266 61.3
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.5e-92 343.6 266 60.5
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.5e-92 343.6 264 62.5
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.9e-92 343.2 266 61.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.9e-92 343.2 266 60.9
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 2.5e-92 342.8 264 61.4
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.5e-92 342.8 266 62.0
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 3.3e-92 342.4 264 60.2
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.3e-92 342.4 266 61.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.7e-92 341.7 264 62.5
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.7e-92 341.7 264 61.4
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.7e-92 341.7 266 61.7
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 7.4e-92 341.3 266 62.0
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 7.4e-92 341.3 268 61.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.3e-91 340.5 268 59.3
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.3e-91 340.5 266 60.9
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.6e-91 340.1 266 61.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.2e-91 339.7 249 62.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.2e-91 339.7 266 60.5
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 3.7e-91 339.0 266 59.4
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 4.8e-91 338.6 249 63.9
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.1e-90 337.4 249 62.7
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.1e-90 337.4 266 59.8
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.8e-90 336.7 264 61.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.8e-90 336.7 267 60.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.4e-90 336.3 264 61.0
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.1e-90 335.9 264 60.2
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 4.1e-90 335.5 266 59.4
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 5.3e-90 335.1 266 59.8
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 5.3e-90 335.1 264 61.4
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 6.9e-90 334.7 266 59.8
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 9.0e-90 334.3 264 61.0
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.5e-89 333.6 267 58.8
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.6e-89 332.8 267 58.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.6e-89 332.8 249 62.7
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.5e-89 332.0 273 59.0
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.0e-88 330.9 271 59.8
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.5e-88 327.8 266 59.4
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-87 327.4 250 62.8
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.1e-87 327.4 278 57.9
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.1e-87 327.4 288 55.9
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.9e-87 326.6 261 60.2
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.5e-87 326.2 266 60.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.5e-87 326.2 266 57.9
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 3.2e-87 325.9 266 57.1
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.2e-87 325.9 264 58.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.6e-86 323.6 308 52.3
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.9e-85 318.9 261 58.2
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.2e-83 313.2 266 57.9
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 2.2e-83 313.2 301 52.5
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 8.2e-83 311.2 264 59.1
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.0e-81 306.6 218 63.8
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 8.5e-80 301.2 264 55.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.2e-79 298.9 325 48.6
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 5.5e-79 298.5 231 61.9
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.8e-75 286.2 368 44.0
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-73 280.0 259 53.3
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.5e-73 279.3 273 50.9
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.5e-73 278.9 251 55.4
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.6e-70 269.2 233 56.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.0e-69 266.2 273 49.8
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.3e-68 262.7 276 50.0
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.9e-65 251.9 204 59.3
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 6.5e-56 221.9 229 51.1
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.7e-51 206.1 157 59.2
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.1e-50 204.5 156 65.4
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.1e-42 177.9 148 59.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.2e-41 174.5 201 44.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.6e-38 164.1 127 56.7
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 8.0e-38 161.8 120 59.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 8.3e-35 151.8 107 61.7
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-33 147.5 110 65.5
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.1e-30 137.1 111 55.0
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.3e-29 133.7 108 61.1
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.3e-24 117.9 91 65.9
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-21 107.5 157 38.9
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-21 107.5 157 38.9
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 5.2e-21 105.9 83 62.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.9e-18 97.4 66 62.1
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 3.5e-17 93.2 66 59.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.5e-12 77.8 58 67.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.9e-11 73.6 142 32.4
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.7e-08 64.3 61 54.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-07 61.2 57 54.4
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.5e-07 60.5 71 43.7
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 4.3e-07 59.7 85 36.5
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 3.6e-06 56.6 52 44.2


User provided reference genes

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