Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 1.3e-236 822.8 436 100.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.5e-24 118.2 400 27.8
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 2.0e-24 117.9 409 26.4
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.0e-23 115.5 405 27.4
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 2.9e-23 114.0 396 26.3
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 3.8e-23 113.6 405 28.9
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 3.8e-23 113.6 403 27.5
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 3.8e-23 113.6 412 25.2
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 6.5e-23 112.8 409 27.6
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.5e-22 110.9 405 27.9
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 7.1e-22 109.4 408 26.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 7.1e-22 109.4 399 27.3
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-21 108.6 405 26.4
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.2e-21 108.6 413 25.7
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 2.7e-21 107.5 409 28.4
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 3.5e-21 107.1 403 27.3
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 3.5e-21 107.1 402 26.9
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 3.5e-21 107.1 424 26.4
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 4.6e-21 106.7 407 26.0
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 6.0e-21 106.3 424 24.3
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.0e-20 105.5 406 26.1
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.0e-20 105.5 405 26.4
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.3e-20 105.1 402 28.4
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.8e-20 104.8 401 26.7
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.0e-20 104.0 399 27.6
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 3.9e-20 103.6 403 27.0
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.9e-20 103.6 404 26.2
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 8.7e-20 102.4 398 25.4
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.1e-19 102.1 341 28.7
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.9e-19 101.3 402 26.1
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.9e-19 101.3 403 25.6
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 3.3e-19 100.5 404 28.0
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 3.3e-19 100.5 400 25.8
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 7.4e-19 99.4 397 25.7
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 7.4e-19 99.4 400 27.2
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 9.6e-19 99.0 406 25.9
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 9.6e-19 99.0 405 26.7
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.3e-18 98.6 411 26.8
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.6e-18 98.2 407 26.8
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.6e-18 98.2 406 25.6
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.6e-18 98.2 398 28.1
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 1.6e-18 98.2 406 26.4
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.1e-18 97.8 162 34.6
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 2.8e-18 97.4 401 25.2
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 2.8e-18 97.4 404 26.5
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.7e-18 97.1 406 25.4
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 4.8e-18 96.7 406 24.4
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.8e-18 96.7 406 25.4
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.8e-18 96.7 402 26.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 6.3e-18 96.3 422 25.4
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.1e-17 95.5 407 25.6
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.8e-17 94.7 235 28.9
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 1.8e-17 94.7 400 24.8
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.4e-17 94.4 400 24.0
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 3.1e-17 94.0 404 25.0
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 3.1e-17 94.0 408 27.0
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 3.1e-17 94.0 218 30.3
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.1e-17 93.6 403 25.1
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 5.3e-17 93.2 407 26.8
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 5.3e-17 93.2 235 28.1
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 5.3e-17 93.2 410 26.1
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 6.9e-17 92.8 442 25.1
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 6.9e-17 92.8 399 25.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 9.0e-17 92.4 404 24.8
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 9.0e-17 92.4 401 24.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 9.0e-17 92.4 408 24.8
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 9.0e-17 92.4 400 26.0
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.2e-16 92.0 408 25.7
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.5e-16 91.7 409 24.2
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.5e-16 91.7 421 24.2
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.0e-16 91.3 400 26.0
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 2.0e-16 91.3 213 32.9
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 3.4e-16 90.5 406 25.9
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 4.5e-16 90.1 397 25.4
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 5.9e-16 89.7 410 24.9
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 7.6e-16 89.4 384 25.8
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 7.6e-16 89.4 404 27.2
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.0e-15 89.0 400 26.2
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.0e-15 89.0 418 25.1
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 1.7e-15 88.2 405 23.7
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.2e-15 87.8 412 24.8
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 2.2e-15 87.8 458 23.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 2.9e-15 87.4 404 25.0
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 2.9e-15 87.4 400 27.0
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 2.9e-15 87.4 245 30.2
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.0e-15 86.7 404 24.5
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 6.5e-15 86.3 402 26.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 8.4e-15 85.9 403 27.0
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 1.1e-14 85.5 412 25.0
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 1.1e-14 85.5 400 24.2
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 1.4e-14 85.1 404 25.7
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.4e-14 85.1 257 29.2
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 3.2e-14 84.0 211 29.4
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 9.3e-14 82.4 411 23.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 1.2e-13 82.0 353 27.8
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.6e-13 81.6 222 31.1
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 2.7e-13 80.9 143 38.5
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 2.3e-12 77.8 396 24.2
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 3.9e-12 77.0 369 23.6
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 5.1e-12 76.6 245 28.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.7e-12 76.3 287 23.7
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 6.7e-12 76.3 141 36.9
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 8.7e-12 75.9 493 23.3
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.5e-11 75.1 201 27.4
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.5e-11 75.1 409 24.9
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 1.5e-11 75.1 224 24.1
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 3.3e-11 73.9 422 23.0
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 3.3e-11 73.9 405 24.9
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 3.3e-11 73.9 232 27.6
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 9.7e-11 72.4 237 27.0
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 9.7e-11 72.4 400 25.0
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 1.8e-09 68.2 191 28.3
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 4.1e-09 67.0 406 25.4
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.2e-08 65.5 317 22.7
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 3.4e-08 63.9 314 22.3
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.7e-07 61.6 122 33.6
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 6.5e-07 59.7 127 29.1


User provided reference genes

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