Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 0.0e+00 1933.7 965 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 1.3e-305 1053.1 833 64.1
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 1.4e-304 1049.7 848 62.3
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 3.4e-282 975.3 904 57.1
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 2.3e-275 952.6 883 57.0
SEGI_05562 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 1.9e-144 517.7 402 61.9
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 4.3e-128 463.4 714 40.5
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 8.1e-119 432.6 382 58.9
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 1.7e-116 424.9 729 38.0
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 1.7e-92 345.1 748 34.0
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 2.2e-63 248.4 604 30.0
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 2.8e-63 248.1 187 64.7
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 1.8e-62 245.4 204 60.8
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 8.0e-58 229.9 192 60.4
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 1.8e-57 228.8 181 62.4
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 5.2e-57 227.3 190 60.0
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 1.2e-56 226.1 186 59.7
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 2.0e-56 225.3 205 58.0
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 2.0e-56 225.3 190 58.9
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 9.8e-56 223.0 205 56.6
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 1.4e-54 219.2 170 64.7
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 1.4e-54 219.2 194 56.2
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 9.5e-51 206.5 188 56.9
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 6.8e-49 200.3 174 56.3
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 8.9e-49 199.9 186 54.3
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.2e-48 199.5 186 54.3
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 3.5e-45 188.0 139 65.5
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 2.1e-37 162.2 135 58.5
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 7.8e-37 160.2 136 61.0
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 3.0e-36 158.3 137 58.4
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 8.6e-36 156.8 126 62.7
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 2.5e-35 155.2 127 61.4
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 4.3e-35 154.5 137 59.1
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 2.1e-34 152.1 136 58.1
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 2.1e-34 152.1 143 55.2
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 8.1e-34 150.2 118 61.9
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 6.8e-33 147.1 124 61.3
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 8.9e-33 146.7 151 52.3
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 3.4e-32 144.8 155 53.5
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 9.9e-32 143.3 155 52.3
SEGI_08517 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 5.4e-30 137.5 118 52.5
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 1.2e-29 136.3 117 58.1
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 4.6e-29 134.4 132 55.3
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 3.3e-27 128.3 117 56.4
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 8.1e-26 123.6 139 48.2
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 8.9e-25 120.2 113 54.9
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 4.4e-24 117.9 155 45.8
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 7.6e-24 117.1 94 59.6
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 9.0e-17 93.6 158 36.7
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 5.4e-14 84.3 96 45.8
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 9.3e-14 83.6 66 62.1
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.5e-11 76.3 54 64.8
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 3.3e-11 75.1 57 61.4
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 4.8e-10 71.2 47 66.0
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 4.8e-10 71.2 47 74.5
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 6.2e-10 70.9 46 76.1
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 1.1e-09 70.1 55 58.2
SEGI_39238 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 8.4e-07 60.5 86 45.3


User provided reference genes

Program Settings