Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 0.0e+00 1094.3 525 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 5.0e-163 578.6 476 58.6
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 3.0e-160 569.3 512 55.7
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.5e-159 567.0 473 58.1
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 9.8e-159 564.3 474 57.6
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 1.7e-158 563.5 515 55.5
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.7e-158 563.5 502 55.4
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 8.3e-158 561.2 477 57.2
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.4e-157 560.5 520 53.3
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 3.1e-157 559.3 473 57.5
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 5.4e-157 558.5 477 56.6
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 5.4e-157 558.5 473 57.7
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 5.4e-157 558.5 506 53.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 5.4e-157 558.5 472 57.4
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 7.0e-157 558.1 467 57.4
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 1.2e-156 557.4 467 58.7
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.2e-156 557.4 469 57.8
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.2e-156 557.4 471 57.3
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.2e-156 557.4 521 53.9
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.6e-156 557.0 471 57.5
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 1.6e-156 557.0 472 57.8
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 3.5e-156 555.8 449 59.7
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.0e-155 554.3 469 57.8
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.3e-155 553.9 521 52.6
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.3e-155 553.9 471 57.7
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.3e-155 553.9 471 57.5
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 1.3e-155 553.9 462 58.0
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 1.3e-155 553.9 472 57.0
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.7e-155 553.5 479 57.2
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.7e-155 553.5 456 59.0
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 2.2e-155 553.1 472 56.8
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 6.5e-155 551.6 470 56.4
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 6.5e-155 551.6 511 53.4
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 1.1e-154 550.8 464 58.6
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.5e-154 550.4 488 55.5
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.9e-154 550.1 522 54.2
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.9e-154 550.1 462 58.7
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 1.9e-154 550.1 513 54.6
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 3.2e-154 549.3 513 54.2
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 3.2e-154 549.3 513 54.0
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 3.2e-154 549.3 470 56.6
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.2e-154 549.3 486 56.0
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 4.2e-154 548.9 513 54.2
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 4.2e-154 548.9 513 54.2
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 4.2e-154 548.9 513 54.2
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 5.5e-154 548.5 520 53.8
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 5.5e-154 548.5 513 54.2
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 5.5e-154 548.5 471 56.9
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 7.2e-154 548.1 470 56.8
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 7.2e-154 548.1 470 56.6
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 7.2e-154 548.1 470 56.4
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 7.2e-154 548.1 471 56.7
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 9.4e-154 547.7 522 53.3
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 9.4e-154 547.7 520 53.8
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 9.4e-154 547.7 472 56.6
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 9.4e-154 547.7 521 53.4
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 1.2e-153 547.4 470 55.7
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.6e-153 547.0 513 54.0
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.6e-153 547.0 487 55.2
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.1e-153 546.6 501 54.9
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.1e-153 546.6 522 53.1
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 2.1e-153 546.6 475 56.2
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.1e-153 546.6 450 58.7
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 2.7e-153 546.2 474 56.1
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.7e-153 546.2 479 56.4
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 4.7e-153 545.4 501 54.9
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 6.1e-153 545.0 513 53.8
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 6.1e-153 545.0 513 53.8
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.1e-153 545.0 479 56.4
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 1.0e-152 544.3 513 54.0
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 1.0e-152 544.3 513 54.0
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.0e-152 544.3 519 52.4
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.8e-152 543.5 482 56.0
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.3e-152 543.1 486 54.3
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 3.0e-152 542.7 472 56.8
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.0e-152 542.3 478 55.9
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 4.0e-152 542.3 473 55.6
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 5.2e-152 542.0 514 54.1
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 5.2e-152 542.0 472 56.8
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 5.2e-152 542.0 469 56.7
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 5.2e-152 542.0 472 55.5
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 6.8e-152 541.6 448 58.9
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 8.8e-152 541.2 470 57.0
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 8.8e-152 541.2 519 53.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 8.8e-152 541.2 468 56.2
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.2e-151 540.8 476 55.7
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.2e-151 540.8 478 55.9
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 1.5e-151 540.4 500 54.0
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.6e-151 539.7 517 53.8
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 2.6e-151 539.7 469 56.9
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 3.4e-151 539.3 455 58.5
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 4.4e-151 538.9 469 56.7
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 5.7e-151 538.5 470 56.6
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.3e-150 537.3 469 56.7
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.3e-150 537.3 482 56.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.7e-150 537.0 471 56.5
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 2.2e-150 536.6 456 57.9
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.2e-150 536.6 469 56.7
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.8e-150 536.2 469 55.9
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 2.8e-150 536.2 469 55.9
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 2.8e-150 536.2 519 52.4
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.8e-150 536.2 469 56.5
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.7e-150 535.8 473 55.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 3.7e-150 535.8 456 57.7
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 6.3e-150 535.0 470 56.2
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.3e-150 534.6 482 55.6
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.4e-149 533.1 495 53.3
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 3.1e-149 532.7 465 57.0
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 4.1e-149 532.3 496 53.0
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 5.4e-149 531.9 477 55.3
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 9.2e-149 531.2 474 54.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.2e-148 530.8 422 60.4
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 5.9e-148 528.5 449 57.0
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 7.7e-148 528.1 477 55.6
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 7.7e-148 528.1 456 56.6
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 1.0e-147 527.7 451 57.9
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.9e-147 526.2 466 54.9
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.0e-147 525.4 478 55.9
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 8.6e-147 524.6 480 54.0
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.1e-146 524.2 474 54.6
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.9e-146 523.5 473 54.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.6e-145 520.4 439 58.3
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.6e-145 519.2 556 49.1
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 5.2e-144 515.4 449 56.6
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.5e-140 502.7 510 50.2
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 7.8e-140 501.5 470 53.4
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 2.3e-139 500.0 526 50.6
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.5e-138 496.5 519 49.3
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.6e-137 493.8 425 56.0
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 2.1e-137 493.4 425 55.8
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 2.8e-137 493.0 470 52.1
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.8e-136 490.3 470 52.3
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 5.2e-136 488.8 479 52.2
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 6.8e-136 488.4 506 50.8
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 4.4e-135 485.7 449 53.0
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 9.8e-135 484.6 472 51.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 8.3e-134 481.5 504 49.8
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.1e-133 481.1 522 48.1
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 4.1e-133 479.2 500 49.6
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.7e-132 476.5 468 53.0
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.7e-129 465.7 435 51.7
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.1e-128 463.0 521 47.8
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.0e-127 460.3 580 43.4
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.2e-126 456.8 361 60.9
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 2.9e-126 456.4 476 50.0
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 2.7e-124 449.9 361 60.1
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 1.4e-120 437.6 457 51.6
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 2.2e-118 430.3 428 50.7
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 5.1e-115 419.1 337 59.1
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.9e-114 417.2 469 47.1
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 9.9e-103 378.3 512 40.6
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 5.4e-101 372.5 345 54.8
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.9e-98 364.0 295 60.7
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.1e-93 348.2 276 61.6
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.8e-87 325.9 267 58.1
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 7.4e-82 308.9 249 60.2
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 6.3e-73 279.3 299 49.2
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 4.5e-71 273.1 244 54.9
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.1e-66 258.5 242 54.1
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 5.3e-56 223.0 411 34.5
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.4e-48 198.4 185 54.1
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 5.9e-47 193.0 199 49.2
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.3e-35 154.5 478 28.2
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 3.6e-28 130.6 130 50.0
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 2.2e-25 121.3 102 60.8
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.5e-21 107.8 93 51.6
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.4e-18 97.1 85 50.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.1e-16 92.4 59 69.5
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 1.4e-16 92.0 58 72.4
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 3.1e-11 74.3 111 37.8
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.2e-08 62.8 143 32.9


User provided reference genes

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