Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 4.0e-165 584.7 299 100.0
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 9.4e-58 228.0 231 49.8
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 2.3e-51 206.8 199 50.3
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.5e-50 204.1 220 44.5
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.5e-50 203.4 246 42.7
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 7.2e-50 201.8 237 42.6
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 9.5e-50 201.4 193 47.2
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.2e-49 201.1 257 40.1
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.2e-49 201.1 261 40.6
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.2e-49 201.1 216 45.8
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.1e-49 200.3 260 38.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.8e-49 199.9 202 46.5
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.8e-49 199.9 267 38.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 6.1e-49 198.7 260 39.2
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-48 198.0 206 46.1
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.0e-48 198.0 206 46.1
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.0e-48 198.0 197 47.2
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.0e-48 198.0 205 46.3
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.4e-48 197.6 216 44.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.3e-48 196.8 235 40.9
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 2.3e-48 196.8 261 39.8
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 3.0e-48 196.4 235 43.0
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 3.0e-48 196.4 205 44.4
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 3.0e-48 196.4 233 42.1
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 4.0e-48 196.1 285 39.3
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 5.2e-48 195.7 194 46.4
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 8.9e-48 194.9 192 46.9
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 8.9e-48 194.9 192 46.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.9e-48 194.9 249 41.8
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 8.9e-48 194.9 230 44.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.2e-47 194.5 262 41.2
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.5e-47 194.1 192 46.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.5e-47 194.1 192 46.4
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 2.6e-47 193.4 205 43.9
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 5.7e-47 192.2 260 38.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 9.8e-47 191.4 215 43.3
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.3e-46 191.0 281 39.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.2e-46 190.3 259 39.4
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.8e-46 189.9 259 39.4
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.8e-46 189.9 263 38.4
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 3.7e-46 189.5 243 39.9
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 3.7e-46 189.5 226 40.7
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 6.3e-46 188.7 257 38.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 8.3e-46 188.3 259 38.6
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.1e-45 188.0 202 42.6
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.8e-45 187.2 281 39.1
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 2.4e-45 186.8 261 39.1
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 3.1e-45 186.4 246 39.8
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 4.1e-45 186.0 260 41.2
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 4.1e-45 186.0 197 45.7
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 5.4e-45 185.7 270 38.1
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 5.4e-45 185.7 272 38.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 5.4e-45 185.7 210 43.8
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 7.0e-45 185.3 234 41.0
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 7.0e-45 185.3 240 42.1
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 7.0e-45 185.3 207 43.5
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 9.2e-45 184.9 281 36.3
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 9.2e-45 184.9 279 38.0
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 9.2e-45 184.9 274 39.4
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 9.2e-45 184.9 221 45.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.6e-44 184.1 219 40.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.0e-44 183.7 273 36.6
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 2.7e-44 183.3 194 46.9
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.7e-44 183.3 200 46.5
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 4.5e-44 182.6 237 38.8
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 4.5e-44 182.6 215 43.3
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.9e-44 182.2 242 38.8
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 5.9e-44 182.2 204 42.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.0e-43 181.4 222 41.0
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.3e-43 180.3 242 38.8
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.3e-43 180.3 256 38.3
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 6.1e-41 172.2 167 47.3
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 6.1e-41 172.2 265 38.9
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.8e-40 170.6 225 40.4
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 5.8e-39 165.6 194 42.8
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.9e-38 163.3 259 37.1
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 7.0e-37 158.7 141 49.6
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.7e-36 156.8 143 50.3
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 3.9e-35 152.9 146 47.9
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.9e-34 150.6 285 33.7
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 5.6e-34 149.1 210 38.1
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 9.5e-34 148.3 285 31.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 3.6e-33 146.4 271 33.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 3.6e-33 146.4 149 45.0
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 3.6e-33 146.4 149 45.0
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 2.3e-32 143.7 277 33.9
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.5e-31 141.0 243 35.0
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 4.4e-31 139.4 295 32.2
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 5.8e-31 139.0 199 38.2
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.4e-29 133.7 205 38.0
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 7.8e-28 128.6 233 36.1
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 6.6e-27 125.6 159 42.1
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 2.5e-26 123.6 204 37.7
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 4.1e-21 106.3 113 45.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.2e-20 104.8 93 48.4
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 4.4e-15 86.3 107 43.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 4.2e-13 79.7 165 34.5
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.1e-12 77.4 110 35.5
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.5e-12 76.6 62 56.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 4.6e-12 76.3 118 39.0
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.3e-11 74.7 122 36.9
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 6.6e-11 72.4 89 41.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.1e-10 71.6 83 39.8
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 2.2e-06 57.4 60 43.3


User provided reference genes

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