Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0081s0072 Marchantia polymorpha HOM05D000693 ORTHO05D020432 6.2e-141 504.2 273 100.0
Pp3c7_10110 Physcomitrium patens HOM05D000693 ORTHO05D020432 1.2e-38 164.5 173 45.1
Pp3c13_11580 Physcomitrium patens HOM05D000693 ORTHO05D020432 1.3e-34 151.0 219 38.8
Pp3c26_13490 Physcomitrium patens HOM05D000693 ORTHO05D020432 8.7e-34 148.3 198 39.9
Pp3c11_15150 Physcomitrium patens HOM05D000693 ORTHO05D020432 2.0e-14 84.0 82 45.1
FvH4_4g34241 Fragaria vesca HOM05D000693 ORTHO05D002444 3.4e-14 83.2 208 30.8
Haze_12195 Corylus avellana HOM05D000693 ORTHO05D001102 7.6e-14 82.0 202 30.2
Cfa009162 Carpinus fangiana HOM05D000693 ORTHO05D002444 1.0e-13 81.6 202 30.2
FAN07G0393 Fragaria x ananassa HOM05D000693 ORTHO05D001102 1.0e-13 81.6 204 30.4
FAN17G1681 Fragaria x ananassa HOM05D000693 ORTHO05D002444 1.3e-13 81.3 204 29.9
SMO356G0741 Selaginella moellendorffii HOM05D000693 ORTHO05D002444 1.3e-13 81.3 146 34.9
HanXRQChr12g0383561 Helianthus annuus HOM05D000693 ORTHO05D002444 1.7e-13 80.9 178 31.5
Prupe.1G251900 Prunus persica HOM05D000693 ORTHO05D002444 2.2e-13 80.5 202 28.7
CANSAT01G1778 Cannabis sativa HOM05D000693 ORTHO05D002444 2.9e-13 80.1 166 30.1
RcHm_v2.0_Chr4g0443711 Rosa chinensis HOM05D000693 ORTHO05D002444 3.8e-13 79.7 171 31.0
COL.COLO4_24188 Corchorus olitorius HOM05D000693 ORTHO05D002444 6.5e-13 79.0 192 31.8
Rhsim12G0116500 Rhododendron simsii HOM05D000693 ORTHO05D002444 6.5e-13 79.0 197 28.4
Ca_22670_v3 Cicer arietinum L. HOM05D000693 ORTHO05D002444 8.4e-13 78.6 224 28.1
FAN12G0379 Fragaria x ananassa HOM05D000693 ORTHO05D002444 8.4e-13 78.6 225 28.0
Lsat_1_v5_gn_4_5501 Lactuca sativa HOM05D000693 ORTHO05D002444 8.4e-13 78.6 195 28.7
Atru.chr11.2045 Acer truncatum HOM05D000693 ORTHO05D002444 1.1e-12 78.2 197 27.4
Dinv15283 Davidia involucrata HOM05D000693 ORTHO05D002444 1.1e-12 78.2 192 29.2
Lalb_Chr09g0334961 Lupinus albus HOM05D000693 ORTHO05D002444 1.1e-12 78.2 197 29.9
BcaC08g46490 Brassica carinata HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 29.9
A07p36860 Brassica napus HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 29.9
C06p44330 Brassica napus HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 29.9
BolC6t39504H Brassica oleracea HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 29.9
BraA07t31251Z Brassica rapa HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 29.9
CSS0022624 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D002444 1.4e-12 77.8 197 28.4
ECA234G3969 Erigeron canadensis HOM05D000693 ORTHO05D002444 1.4e-12 77.8 179 33.0
MD16G1094700 Malus domestica HOM05D000693 ORTHO05D002444 1.4e-12 77.8 202 28.2
FAN22G1713 Fragaria x ananassa HOM05D000693 ORTHO05D002444 1.9e-12 77.4 204 29.9
MSTRG.593 Avicennia marina HOM05D000693 ORTHO05D002444 3.2e-12 76.6 174 29.9
Cpa.g.sc69.58 Carica papaya HOM05D000693 ORTHO05D002444 3.2e-12 76.6 166 30.7
Thhalv10019595m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 3.2e-12 76.6 197 28.9
Gorai.008G159400 Gossypium raimondii HOM05D000693 ORTHO05D002444 3.2e-12 76.6 197 28.9
AagrBONN_evm.TU.Sc2ySwM_344.4112 Anthoceros agrestis HOM05D000693 ORTHO05D002444 4.2e-12 76.3 161 32.9
MBI16_g27092_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D002444 4.2e-12 76.3 174 30.5
Actinidia13504 Actinidia chinensis HOM05D000693 ORTHO05D002444 7.1e-12 75.5 161 31.7
Gohir.D12G148100 Gossypium hirsutum HOM05D000693 ORTHO05D002444 7.1e-12 75.5 190 30.0
Hund06001 Selenicereus undatus HOM05D000693 ORTHO05D002444 7.1e-12 75.5 175 29.7
MD13G1093500 Malus domestica HOM05D000693 ORTHO05D002444 9.3e-12 75.1 202 27.2
Sed0026964 Sechium edule HOM05D000693 ORTHO05D002444 9.3e-12 75.1 202 27.2
AL2G29850 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.2e-11 74.7 197 28.9
Carub.0002s1716 Capsella rubella HOM05D000693 ORTHO05D002444 1.2e-11 74.7 166 30.1
Mapoly0003s0242 Marchantia polymorpha HOM05D000693 ORTHO05D002444 1.2e-11 74.7 206 27.7
MELO3C010664.2 Cucumis melo HOM05D000693 ORTHO05D002444 1.6e-11 74.3 202 28.2
Lj3A1054T85 Lonicera japonica HOM05D000693 ORTHO05D002444 2.1e-11 73.9 213 26.8
Hund25356 Selenicereus undatus HOM05D000693 ORTHO05D002444 2.1e-11 73.9 166 28.9
vmacro16238 Vaccinium macrocarpon HOM05D000693 ORTHO05D002444 2.1e-11 73.9 176 27.8
Gohir.A05G314100 Gossypium hirsutum HOM05D000693 ORTHO05D002444 2.7e-11 73.6 194 28.9
Gohir.A12G143400 Gossypium hirsutum HOM05D000693 ORTHO05D002444 2.7e-11 73.6 197 27.4
Gohir.D05G315600 Gossypium hirsutum HOM05D000693 ORTHO05D002444 2.7e-11 73.6 194 28.9
Gorai.009G337600 Gossypium raimondii HOM05D000693 ORTHO05D002444 2.7e-11 73.6 194 28.9
Aqoxy3G02921 Aquilegia oxysepala HOM05D000693 ORTHO05D002444 3.5e-11 73.2 197 27.4
Migut.L01419 Erythranthe guttata HOM05D000693 ORTHO05D002444 3.5e-11 73.2 166 28.3
Zm00001eb098280 Zea mays HOM05D000693 ORTHO05D002444 3.5e-11 73.2 166 27.7
AT1G70480 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 4.6e-11 72.8 178 29.8
Peaxi162Scf00952g00021 Petunia axillaris HOM05D000693 ORTHO05D002444 4.6e-11 72.8 206 26.7
Pp3c2_10400 Physcomitrium patens HOM05D000693 ORTHO05D002444 4.6e-11 72.8 182 29.1
Sp5g25550 Schrenkiella parvula HOM05D000693 ORTHO05D002444 4.6e-11 72.8 166 29.5
GSVIVG01013760001 Vitis vinifera HOM05D000693 ORTHO05D002444 4.6e-11 72.8 171 29.2
ClCG08G017980 Citrullus lanatus HOM05D000693 ORTHO05D002444 6.1e-11 72.4 202 27.7
Eucgr.H02587 Eucalyptus grandis HOM05D000693 ORTHO05D002444 6.1e-11 72.4 197 27.9
CARHR063640 Cardamine hirsuta HOM05D000693 ORTHO05D002444 7.9e-11 72.0 197 27.9
Nitab4.5_0004039g0040 Nicotiana tabacum HOM05D000693 ORTHO05D002444 7.9e-11 72.0 197 27.4
Potri.010G041700 Populus trichocarpa HOM05D000693 ORTHO05D002444 7.9e-11 72.0 202 26.7
SalBow2G3571 Salvia bowleyana HOM05D000693 ORTHO05D000554 7.9e-11 72.0 166 28.9
SEGI_38479 Sequoiadendron giganteum HOM05D000693 ORTHO05D002444 7.9e-11 72.0 166 28.3
THA.LOC104822970 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 7.9e-11 72.0 164 30.5
AUR62014054 Chenopodium quinoa HOM05D000693 ORTHO05D002444 1.0e-10 71.6 204 28.4
Duzib268G0613 Durio zibethinus HOM05D000693 ORTHO05D002444 1.0e-10 71.6 239 27.2
Glyma.18G139000 Glycine max HOM05D000693 ORTHO05D002444 1.0e-10 71.6 217 27.6
TAR629G3151 Trochodendron aralioides HOM05D000693 ORTHO05D002444 1.3e-10 71.2 197 29.4
arahy.Tifrunner.gnm1.ann1.Q9BF43 Arachis hypogaea HOM05D000693 ORTHO05D002444 1.8e-10 70.9 255 27.8
CsaV3_2G024620 Cucumis sativus L. HOM05D000693 ORTHO05D002444 1.8e-10 70.9 202 27.7
Gohir.D01G149000 Gossypium hirsutum HOM05D000693 ORTHO05D002444 1.8e-10 70.9 236 28.4
Pp3c15_5040 Physcomitrium patens HOM05D000693 ORTHO05D002444 1.8e-10 70.9 184 29.3
CDE02G1567 Ceratophyllum demersum HOM05D000693 ORTHO05D002444 2.3e-10 70.5 197 27.4
AUR62005392 Chenopodium quinoa HOM05D000693 ORTHO05D002444 2.3e-10 70.5 166 31.3
Thhalv10008158m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 2.3e-10 70.5 198 27.3
Psat4g124640 Pisum sativum HOM05D000693 ORTHO05D002444 2.3e-10 70.5 166 28.3
QL03p059849 Quercus lobata HOM05D000693 ORTHO05D002444 2.3e-10 70.5 197 26.9
Nitab4.5_0000069g0380 Nicotiana tabacum HOM05D000693 ORTHO05D002444 3.0e-10 70.1 197 26.9
Pp3c26_13080 Physcomitrium patens HOM05D000693 ORTHO05D002444 3.0e-10 70.1 219 26.5
MCO15G535 Micromonas commoda HOM05D061938 ORTHO05D020432 3.9e-10 69.7 217 25.3
Pp3c1_10570 Physcomitrium patens HOM05D000693 ORTHO05D002444 3.9e-10 69.7 162 28.4
TPR.G11684 Trifolium pratense HOM05D000693 ORTHO05D002444 3.9e-10 69.7 240 28.3
arahy.Tifrunner.gnm1.ann1.LW7WL4 Arachis hypogaea HOM05D000693 ORTHO05D002444 5.1e-10 69.3 255 27.5
Carub.0001s2310 Capsella rubella HOM05D000693 ORTHO05D002444 5.1e-10 69.3 197 24.9
CARHR023990 Cardamine hirsuta HOM05D000693 ORTHO05D002444 5.1e-10 69.3 197 25.9
Manes.12G027600 Manihot esculenta HOM05D000693 ORTHO05D002444 5.1e-10 69.3 206 26.7
VMungo0251G3059 Vigna mungo HOM05D000693 ORTHO05D002444 5.1e-10 69.3 224 26.8
Duzib251G0648 Durio zibethinus HOM05D000693 ORTHO05D002444 8.7e-10 68.6 246 26.4
PGR119G0615 Punica granatum HOM05D000693 ORTHO05D002444 8.7e-10 68.6 171 28.7
SGA_v2.0_scaffold165G38236 Striga asiatica HOM05D000693 ORTHO05D002444 8.7e-10 68.6 183 26.8
BcaB03g11952 Brassica carinata HOM05D000693 ORTHO05D002444 1.1e-09 68.2 198 26.8
Ciclev10032036m.g Citrus clementina HOM05D000693 ORTHO05D002444 1.1e-09 68.2 166 27.1
DCAR_026535 Daucus carota HOM05D000693 ORTHO05D002444 1.1e-09 68.2 166 27.1
Gorai.002G185100 Gossypium raimondii HOM05D000693 ORTHO05D002444 1.1e-09 68.2 236 27.1
Lj4g0011834 Lotus japonicus HOM05D000693 ORTHO05D002444 1.1e-09 68.2 220 26.4
Mapoly0075s0073 Marchantia polymorpha HOM05D000693 ORTHO05D002444 1.1e-09 68.2 162 27.2
Sc11g0001130 Simmondsia chinensis HOM05D000693 ORTHO05D002444 1.5e-09 67.8 175 28.0
BcaC07g39212 Brassica carinata HOM05D000693 ORTHO05D002444 1.9e-09 67.4 198 26.8
Os09g0327550 Oryza sativa ssp. japonica HOM05D000693 ORTHO05D002444 2.5e-09 67.0 166 26.5
Phvul.003G061200 Phaseolus vulgaris HOM05D000693 ORTHO05D002444 2.5e-09 67.0 241 25.7
C08p22080 Brassica napus HOM05D000693 ORTHO05D002444 3.3e-09 66.6 198 26.8
BolC8t49852H Brassica oleracea HOM05D000693 ORTHO05D002444 3.3e-09 66.6 198 26.8
Cc11_g14740 Coffea canephora HOM05D000693 ORTHO05D002444 3.3e-09 66.6 229 27.9
Glyma.08G285800 Glycine max HOM05D000693 ORTHO05D002444 3.3e-09 66.6 244 26.2
TWI75G0062 Tripterygium wilfordii HOM05D000693 ORTHO05D002444 3.3e-09 66.6 196 25.5
EL10Ac6g13690 Beta vulgaris HOM05D000693 ORTHO05D002444 4.3e-09 66.2 177 29.4
Medtr8g064820 Medicago truncatula HOM05D000693 ORTHO05D002444 4.3e-09 66.2 230 27.0
Gohir.A01G161600 Gossypium hirsutum HOM05D000693 ORTHO05D002444 5.7e-09 65.9 235 26.8
Thecc.02G252000 Theobroma cacao HOM05D000693 ORTHO05D002444 5.7e-09 65.9 244 28.3
A08p28090 Brassica napus HOM05D000693 ORTHO05D002444 9.7e-09 65.1 198 26.3
BraA08t34735Z Brassica rapa HOM05D000693 ORTHO05D002444 9.7e-09 65.1 198 26.3
CiPaw.05G152400 Carya illinoinensis HOM05D000693 ORTHO05D002444 9.7e-09 65.1 152 28.3
Ah.02g129980 Amaranthus hybridus HOM05D000693 ORTHO05D001102 2.8e-08 63.5 166 27.1
THA.LOC104822153 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 2.8e-08 63.5 201 27.4
HPP92_008037 Vanilla planifolia HOM05D000693 ORTHO05D002444 2.8e-08 63.5 166 27.1
BcaB03g14806 Brassica carinata HOM05D000693 ORTHO05D002444 6.3e-08 62.4 143 29.4
Aa31LG4G10470 Aethionema arabicum HOM05D000693 ORTHO05D002444 8.2e-08 62.0 140 32.1
Sp1g21020 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.1e-07 61.6 197 23.4
BcaB03g14140 Brassica carinata HOM05D000693 ORTHO05D002444 2.4e-07 60.5 198 24.7
C07p20350 Brassica napus HOM05D000693 ORTHO05D002444 2.4e-07 60.5 198 24.7
BraA07t29131Z Brassica rapa HOM05D000693 ORTHO05D002444 2.4e-07 60.5 198 24.7
Aa31LG7G7500 Aethionema arabicum HOM05D000693 ORTHO05D002444 6.9e-07 58.9 197 24.4
Ah.03g132760 Amaranthus hybridus HOM05D000693 ORTHO05D002444 9.0e-07 58.5 98 35.7
BcaC06g35046 Brassica carinata HOM05D000693 ORTHO05D002444 1.2e-06 58.2 198 24.2
BolC7t42555H Brassica oleracea HOM05D000693 ORTHO05D002444 1.2e-06 58.2 198 24.2
DCAR_031113 Daucus carota HOM05D000693 ORTHO05D002444 2.0e-06 57.4 139 28.1
THA.LOC109117023 Tarenaya hassleriana HOM05D000693 ORTHO05D002444 2.0e-06 57.4 118 30.5
AL1G37320 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 4.5e-06 56.2 199 23.6
Sp1g20950 Schrenkiella parvula HOM05D000693 ORTHO05D002444 5.9e-06 55.8 126 27.8
Carub.0001s2317 Capsella rubella HOM05D000693 ORTHO05D002444 7.7e-06 55.5 97 23.7
AT1G23560 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 1.0e-05 55.1 200 24.5


User provided reference genes

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