Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 2.5e-206 721.8 362 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 3.2e-100 369.4 316 57.6
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 5.4e-100 368.6 296 59.1
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 2.8e-96 356.3 332 54.8
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 5.8e-94 348.6 299 57.5
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 1.3e-85 320.9 288 56.6
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 2.2e-85 320.1 286 57.0
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 3.8e-85 319.3 289 54.3
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 3.8e-85 319.3 286 56.3
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 6.4e-85 318.5 283 56.9
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 8.4e-85 318.2 291 57.0
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 1.4e-84 317.4 283 56.5
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 1.4e-84 317.4 291 55.0
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 4.2e-84 315.8 291 56.4
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 4.2e-84 315.8 293 55.6
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 4.2e-84 315.8 288 55.9
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 4.2e-84 315.8 288 57.6
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 2.1e-83 313.5 291 56.7
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 2.1e-83 313.5 291 52.9
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 3.5e-83 312.8 283 56.2
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 3.5e-83 312.8 290 53.4
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 6.0e-83 312.0 289 54.0
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 6.0e-83 312.0 291 56.4
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 3.0e-82 309.7 294 55.1
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 1.5e-81 307.4 283 52.3
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 1.5e-81 307.4 316 48.7
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 2.5e-81 306.6 289 54.0
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 4.3e-81 305.8 291 51.5
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 6.9e-79 298.5 272 56.2
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.5e-78 297.4 302 53.6
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 3.0e-74 283.1 288 51.0
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.6e-72 277.3 252 56.3
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 2.8e-72 276.6 296 51.7
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 6.2e-72 275.4 314 48.4
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 1.4e-71 274.2 241 56.4
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 2.2e-69 266.9 258 53.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 7.1e-68 261.9 248 54.8
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 3.4e-62 243.0 277 46.9
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.2e-56 223.8 225 50.2
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.8e-55 220.7 239 49.8
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 1.8e-55 220.7 257 50.2
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 9.7e-49 198.4 156 60.9
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 1.7e-48 197.6 169 58.0
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.7e-40 171.0 122 61.5
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 2.2e-40 170.6 153 55.6
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 1.6e-38 164.5 130 60.8
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.2e-27 128.3 130 48.5
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.2e-25 121.7 206 37.4
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.2e-25 121.7 130 47.7
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 2.2e-24 117.5 81 64.2
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.3e-24 115.9 140 43.6
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 6.3e-24 115.9 150 44.0
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.9e-21 107.1 101 57.4
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.8e-21 106.7 133 43.6
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 8.0e-19 99.0 97 53.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 9.2e-07 58.9 107 34.6


User provided reference genes

Program Settings