Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 2.7e-161 572.0 305 100.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.1e-65 253.4 317 45.4
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 3.0e-59 233.0 307 46.9
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.7e-54 217.2 312 43.6
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 1.4e-53 214.2 313 43.8
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 4.2e-53 212.6 317 42.3
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 5.5e-53 212.2 312 43.9
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 9.3e-53 211.5 318 41.8
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 3.5e-52 209.5 316 40.2
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 6.0e-52 208.8 312 42.0
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.0e-51 208.0 242 50.4
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 3.0e-51 206.5 312 41.7
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 5.1e-51 205.7 313 40.6
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 6.7e-51 205.3 314 41.7
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.3e-50 203.0 316 40.5
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.3e-50 203.0 312 41.0
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.3e-50 203.0 312 41.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 5.7e-50 202.2 312 40.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.7e-50 202.2 312 40.7
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.4e-50 201.8 312 40.7
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 7.4e-50 201.8 312 40.7
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.7e-50 201.4 316 40.2
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.3e-49 201.1 312 40.4
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 6.3e-49 198.7 316 39.6
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 6.3e-49 198.7 316 39.9
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 8.2e-49 198.4 312 41.0
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.4e-48 197.6 316 39.6
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 1.4e-48 197.6 316 39.6
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.4e-48 197.6 312 40.1
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.8e-48 197.2 312 38.8
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.8e-48 197.2 316 39.6
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 1.8e-48 197.2 316 39.6
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 6.9e-48 195.3 312 40.1
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 9.0e-48 194.9 312 39.4
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 9.0e-48 194.9 312 39.1
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 9.0e-48 194.9 316 41.5
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 9.0e-48 194.9 316 38.6
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.2e-47 194.5 316 38.6
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 1.2e-47 194.5 312 39.7
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 1.5e-47 194.1 312 38.8
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.5e-47 194.1 316 38.6
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 2.0e-47 193.7 322 41.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 2.6e-47 193.4 316 38.9
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 2.6e-47 193.4 316 39.2
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.6e-47 193.4 312 38.8
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 3.4e-47 193.0 316 39.6
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 3.4e-47 193.0 252 44.0
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 3.4e-47 193.0 316 38.3
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 3.4e-47 193.0 287 42.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 4.5e-47 192.6 316 38.9
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 5.9e-47 192.2 316 38.6
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 7.6e-47 191.8 317 38.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 7.6e-47 191.8 317 38.2
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 7.6e-47 191.8 316 41.5
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 7.6e-47 191.8 318 38.4
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.0e-46 191.4 316 38.6
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 1.0e-46 191.4 312 39.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.3e-46 191.0 312 38.8
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.7e-46 190.7 320 37.5
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.7e-46 190.7 312 39.7
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.7e-46 190.7 300 39.7
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.2e-46 190.3 316 41.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.2e-46 190.3 316 37.3
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 2.9e-46 189.9 341 37.2
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 2.9e-46 189.9 341 37.2
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 3.8e-46 189.5 319 38.2
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 5.0e-46 189.1 317 38.8
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.0e-46 189.1 321 38.9
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 8.5e-46 188.3 316 36.4
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 8.5e-46 188.3 316 37.3
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.1e-45 188.0 283 41.3
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.1e-45 188.0 286 39.2
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.4e-45 187.6 314 38.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 1.9e-45 187.2 319 37.3
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.9e-45 187.2 288 40.3
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 4.2e-45 186.0 302 41.7
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 4.2e-45 186.0 319 38.2
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 4.2e-45 186.0 305 39.3
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 7.2e-45 185.3 316 37.3
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 7.2e-45 185.3 320 38.8
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 9.3e-45 184.9 305 37.7
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 9.3e-45 184.9 319 36.7
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 1.2e-44 184.5 313 39.9
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 2.1e-44 183.7 284 40.5
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.7e-44 183.3 345 36.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 2.7e-44 183.3 319 37.6
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 3.6e-44 183.0 237 46.4
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 4.6e-44 182.6 280 38.9
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 4.6e-44 182.6 282 39.4
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 7.9e-44 181.8 302 39.4
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 7.9e-44 181.8 325 37.5
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.0e-43 181.4 312 37.2
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.3e-43 180.3 287 38.0
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 2.5e-42 176.8 321 34.3
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.3e-42 176.4 231 45.0
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 7.4e-42 175.3 358 34.9
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 6.3e-41 172.2 234 43.6
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 1.4e-40 171.0 204 48.0
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 9.1e-40 168.3 335 36.4
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 5.9e-39 165.6 237 43.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.2e-38 163.7 304 39.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 3.2e-37 159.8 313 35.5
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 5.5e-37 159.1 285 37.2
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.0e-35 154.8 197 46.2
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 2.3e-35 153.7 248 39.9
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 6.7e-35 152.1 253 39.9
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 2.6e-34 150.2 276 36.2
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 2.8e-33 146.7 208 43.3
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.8e-32 144.1 334 33.2
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.2e-31 141.4 282 35.8
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.0e-30 138.3 274 36.5
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.2e-29 133.3 356 31.2
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 5.3e-24 115.9 189 40.7
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.2e-20 104.8 158 44.3
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 3.5e-15 86.7 81 56.8
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.2e-14 84.0 116 44.0
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.4e-08 63.9 74 45.9


User provided reference genes

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