Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.3e-205 719.5 375 100.0
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 2.8e-67 260.0 318 50.3
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 5.0e-64 249.2 218 56.0
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 2.3e-61 240.4 371 41.8
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 2.5e-60 236.9 310 45.2
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 3.7e-59 233.0 364 40.9
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 6.9e-58 228.8 357 39.5
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 9.1e-58 228.4 299 41.1
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 2.6e-57 226.9 331 39.6
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 5.9e-57 225.7 261 46.7
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 7.7e-57 225.3 381 38.3
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 2.2e-56 223.8 335 39.4
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 2.2e-56 223.8 380 38.7
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 2.9e-56 223.4 277 43.3
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.4e-55 221.1 270 44.4
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.9e-55 220.7 288 42.7
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 2.5e-55 220.3 381 37.5
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 7.2e-55 218.8 372 38.2
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.6e-54 217.6 255 44.7
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 2.1e-54 217.2 353 36.8
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 7.9e-54 215.3 325 39.7
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 7.9e-54 215.3 348 38.5
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 7.9e-54 215.3 382 38.0
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 7.9e-54 215.3 334 38.9
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.0e-53 214.9 279 43.0
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.0e-53 214.9 361 38.2
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.3e-53 213.8 291 41.9
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 2.3e-53 213.8 245 46.1
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 3.0e-53 213.4 337 40.4
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 3.0e-53 213.4 271 42.1
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 3.0e-53 213.4 281 43.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 5.1e-53 212.6 263 44.5
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 5.1e-53 212.6 263 44.5
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 5.1e-53 212.6 239 46.9
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 5.1e-53 212.6 210 48.6
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.0e-52 210.7 265 43.4
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 2.0e-52 210.7 278 42.1
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 2.0e-52 210.7 283 42.0
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 2.0e-52 210.7 269 44.2
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 2.6e-52 210.3 262 43.9
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.3e-52 209.9 371 37.7
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 3.3e-52 209.9 280 41.1
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 3.3e-52 209.9 287 42.5
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 4.4e-52 209.5 279 42.7
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 5.7e-52 209.1 387 36.7
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 7.4e-52 208.8 180 55.0
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 7.4e-52 208.8 368 38.6
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 9.7e-52 208.4 357 39.2
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.3e-51 208.0 380 36.3
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.7e-51 207.6 253 46.6
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.7e-51 207.6 376 37.0
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.8e-51 206.8 392 34.9
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 4.8e-51 206.1 282 41.8
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 6.3e-51 205.7 362 36.7
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 8.2e-51 205.3 278 41.4
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 8.2e-51 205.3 380 36.1
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 1.1e-50 204.9 377 37.1
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.4e-50 204.5 259 42.9
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 1.4e-50 204.5 294 40.1
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.4e-50 204.5 368 38.3
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.8e-50 204.1 260 43.1
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 1.8e-50 204.1 363 38.0
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 2.4e-50 203.8 235 45.1
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 3.1e-50 203.4 294 41.2
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 3.1e-50 203.4 262 42.7
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 3.1e-50 203.4 270 43.3
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.1e-50 203.4 271 41.0
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 4.1e-50 203.0 246 46.3
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 4.1e-50 203.0 254 44.9
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 4.1e-50 203.0 350 34.3
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 4.1e-50 203.0 375 37.3
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 7.0e-50 202.2 393 35.9
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 9.1e-50 201.8 381 35.2
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.2e-49 201.4 257 43.2
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.2e-49 201.4 299 39.1
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.5e-49 201.1 304 41.4
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.5e-49 201.1 356 36.2
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.5e-49 201.1 364 38.2
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 2.0e-49 200.7 360 36.4
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 2.6e-49 200.3 271 40.2
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.5e-49 199.9 273 40.7
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.0e-48 198.4 423 36.6
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 1.0e-48 198.4 270 43.0
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 2.2e-48 197.2 403 39.2
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 3.8e-48 196.4 248 44.0
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 5.0e-48 196.1 253 42.3
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 8.5e-48 195.3 254 39.4
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.5e-47 194.5 373 35.9
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.5e-47 193.7 331 37.2
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 4.2e-47 193.0 265 43.4
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 6.1e-46 189.1 320 38.4
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.3e-45 187.2 397 35.8
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 8.8e-45 185.3 333 36.9
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 4.1e-42 176.4 326 35.9
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 1.2e-41 174.9 230 41.3
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.0e-41 174.1 394 31.2
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 2.2e-40 170.6 265 39.2
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 2.2e-40 170.6 284 37.7
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.8e-35 153.7 140 49.3
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 2.2e-32 144.1 290 34.1
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.0e-32 142.9 120 53.3
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.2e-30 138.3 384 31.0
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 3.6e-30 136.7 177 43.5
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 1.4e-29 134.8 168 43.5
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.0e-29 133.7 122 50.8
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 3.1e-26 123.6 248 34.3
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 3.1e-26 123.6 189 39.2
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.6e-25 121.3 170 40.6
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.0e-24 118.6 135 48.1
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.9e-24 117.1 163 40.5
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 1.8e-21 107.8 158 39.9
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 2.3e-21 107.5 244 31.6
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 5.7e-20 102.8 145 35.2
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 2.1e-14 84.3 85 51.8
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 3.7e-11 73.6 75 50.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 1.7e-08 64.7 69 43.5
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.0e-08 63.9 188 29.8
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.5e-07 61.6 142 33.1
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 5.6e-07 59.7 119 37.0


User provided reference genes

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