Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.2e-311 1072.4 568 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.1e-139 501.1 563 49.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.1e-127 460.3 574 45.3
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.0e-124 451.4 577 44.4
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.7e-124 450.7 570 44.4
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.9e-124 449.9 574 44.1
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.2e-123 446.4 573 43.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 5.5e-123 445.7 584 43.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 7.1e-123 445.3 583 43.7
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 9.3e-123 444.9 571 44.1
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.6e-122 444.1 573 44.2
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 4.6e-122 442.6 589 43.6
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.0e-121 441.4 586 46.4
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.8e-121 440.7 581 42.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.3e-121 440.3 587 43.6
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 3.9e-121 439.5 583 43.1
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 8.7e-121 438.3 573 41.9
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.7e-121 438.3 571 43.4
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-120 438.0 571 43.6
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.9e-120 437.2 570 42.1
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 2.5e-120 436.8 574 43.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 3.3e-120 436.4 573 43.6
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 4.3e-120 436.0 583 42.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.4e-120 435.3 586 43.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 7.4e-120 435.3 565 43.7
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 7.4e-120 435.3 588 41.8
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 9.7e-120 434.9 576 42.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.2e-119 433.7 574 42.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.2e-119 433.7 572 43.7
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.2e-119 433.7 574 42.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.8e-119 433.3 579 43.0
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-119 433.0 571 43.1
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.8e-119 432.6 585 42.2
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 4.8e-119 432.6 603 41.5
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 6.3e-119 432.2 569 41.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 8.2e-119 431.8 574 43.0
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.4e-118 431.0 566 42.2
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.4e-118 431.0 591 42.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-118 430.6 567 43.9
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.1e-118 429.9 587 42.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 3.1e-118 429.9 573 42.1
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.1e-118 429.9 574 41.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.1e-118 429.5 573 41.9
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 9.0e-118 428.3 576 42.9
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.2e-117 427.9 571 41.2
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.5e-117 427.6 596 42.3
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.5e-117 427.6 577 42.5
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.5e-117 427.6 585 42.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.0e-117 427.2 578 41.7
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.6e-117 426.8 581 41.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.6e-117 426.8 570 41.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.4e-117 426.4 573 41.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 4.5e-117 426.0 583 42.7
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 4.5e-117 426.0 577 43.0
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.5e-117 426.0 584 42.3
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.0e-116 424.9 586 41.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-116 424.9 583 42.5
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.7e-116 424.1 582 43.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.2e-116 423.7 588 41.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 2.2e-116 423.7 590 42.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 5.0e-116 422.5 584 42.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 6.5e-116 422.2 564 42.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 6.5e-116 422.2 572 43.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 6.5e-116 422.2 572 43.7
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.5e-116 422.2 586 40.4
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.4e-115 421.0 576 41.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-115 421.0 572 43.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.5e-115 420.2 573 41.0
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.2e-115 419.9 594 41.2
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.2e-115 419.5 578 42.0
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 5.5e-115 419.1 581 41.3
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.2e-115 418.7 577 42.1
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 9.4e-115 418.3 573 42.1
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 9.4e-115 418.3 606 40.8
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 3.6e-114 416.4 568 42.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 4.6e-114 416.0 581 40.6
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 6.1e-114 415.6 561 41.5
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 6.1e-114 415.6 561 41.5
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 6.1e-114 415.6 579 42.1
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 6.1e-114 415.6 577 42.1
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.9e-114 415.2 576 40.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.0e-113 413.3 587 41.4
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.8e-113 411.8 546 42.7
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.0e-112 410.6 585 40.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.8e-111 406.8 579 41.1
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 8.2e-111 405.2 593 39.0
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.8e-110 404.1 573 41.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 3.1e-110 403.3 645 38.8
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.0e-109 400.6 584 40.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.0e-108 398.3 602 40.9
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.9e-107 394.0 587 40.4
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.9e-107 394.0 643 38.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.5e-107 392.5 578 40.5
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.5e-107 392.5 570 42.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 7.0e-102 375.6 528 42.8
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 9.1e-102 375.2 503 41.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 5.9e-101 372.5 537 40.6
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.1e-99 368.2 581 38.2
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.6e-98 363.2 569 38.8
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.1e-94 350.1 497 39.8
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.4e-80 303.5 411 41.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.2e-73 279.6 466 39.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.3e-67 259.2 228 53.9
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.1e-66 257.7 601 34.6
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.6e-64 250.8 211 54.0
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.9e-55 220.7 173 59.0
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.2e-49 199.9 412 35.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 6.0e-45 186.4 184 49.5
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.3e-44 185.3 315 37.1
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.8e-41 172.9 322 37.9
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 5.4e-38 163.3 233 42.1
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 4.2e-30 137.1 173 45.1
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-26 125.6 387 28.4
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-21 108.2 173 39.3
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-16 92.4 63 57.1
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-14 85.9 156 33.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 3.7e-10 70.9 153 33.3


User provided reference genes

Program Settings