Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.5e-86 322.8 164 100.0
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 3.0e-58 228.8 157 71.3
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.3e-53 213.4 162 66.0
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.6e-49 199.1 149 63.1
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 9.8e-49 197.2 149 61.7
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 9.8e-49 197.2 149 61.7
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.3e-48 196.8 146 63.7
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 2.2e-48 196.1 145 65.5
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 2.8e-48 195.7 149 61.7
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 4.9e-48 194.9 145 63.4
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 8.3e-48 194.1 145 63.4
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 4.1e-47 191.8 158 58.2
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 9.2e-47 190.7 152 59.2
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 1.2e-46 190.3 162 56.8
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 1.2e-46 190.3 151 60.9
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 1.6e-46 189.9 153 62.1
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 2.0e-46 189.5 159 57.9
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 2.0e-46 189.5 158 58.2
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 2.7e-46 189.1 158 57.6
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 4.5e-46 188.3 149 59.7
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 5.9e-46 188.0 152 60.5
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 5.9e-46 188.0 145 62.8
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 5.9e-46 188.0 151 59.6
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 7.8e-46 187.6 148 60.1
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 7.8e-46 187.6 162 57.4
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 1.0e-45 187.2 153 56.9
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 1.3e-45 186.8 146 59.6
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 1.3e-45 186.8 146 60.3
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 1.3e-45 186.8 146 60.3
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.3e-45 186.8 148 60.8
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.3e-45 186.8 148 60.8
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 1.7e-45 186.4 155 56.8
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 2.3e-45 186.0 158 57.0
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 2.9e-45 185.7 147 59.9
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 2.9e-45 185.7 148 60.1
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 2.9e-45 185.7 146 58.9
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 2.9e-45 185.7 146 61.0
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 2.9e-45 185.7 148 59.5
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 2.9e-45 185.7 149 59.1
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 3.8e-45 185.3 151 58.3
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 3.8e-45 185.3 147 58.5
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 3.8e-45 185.3 146 61.0
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 5.0e-45 184.9 149 58.4
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 5.0e-45 184.9 146 59.6
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 6.6e-45 184.5 147 59.2
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 6.6e-45 184.5 150 58.7
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 8.6e-45 184.1 144 61.8
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 8.6e-45 184.1 148 58.8
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 1.1e-44 183.7 169 55.6
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 1.1e-44 183.7 146 59.6
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 1.5e-44 183.3 135 63.0
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 1.9e-44 183.0 147 58.5
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 1.9e-44 183.0 139 61.2
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 1.9e-44 183.0 148 58.8
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 2.5e-44 182.6 154 57.1
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 2.5e-44 182.6 169 55.6
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 2.5e-44 182.6 151 58.3
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 2.5e-44 182.6 148 58.1
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 2.5e-44 182.6 149 58.4
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 3.3e-44 182.2 147 59.2
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 3.3e-44 182.2 145 59.3
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 4.3e-44 181.8 151 58.9
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 4.3e-44 181.8 160 55.6
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 4.3e-44 181.8 151 57.6
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 5.6e-44 181.4 148 58.1
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 7.3e-44 181.0 158 53.8
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 7.3e-44 181.0 150 58.0
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 9.5e-44 180.6 148 58.1
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 9.5e-44 180.6 148 57.4
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 1.6e-43 179.9 169 53.8
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.6e-43 179.9 151 57.0
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 1.6e-43 179.9 151 57.0
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 2.1e-43 179.5 148 57.4
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.8e-43 179.1 150 58.0
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 2.8e-43 179.1 148 57.4
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 3.6e-43 178.7 148 57.4
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 4.7e-43 178.3 150 58.0
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 4.7e-43 178.3 146 58.9
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 4.7e-43 178.3 155 54.8
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 4.7e-43 178.3 141 58.9
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 6.1e-43 177.9 160 52.5
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 8.0e-43 177.6 151 56.3
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 8.0e-43 177.6 169 53.3
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 1.0e-42 177.2 169 52.7
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.0e-42 177.2 169 53.8
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.0e-42 177.2 169 53.8
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.0e-42 177.2 147 59.2
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 1.4e-42 176.8 169 52.7
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.4e-42 176.8 158 55.1
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 1.8e-42 176.4 150 56.7
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 3.0e-42 175.6 169 52.7
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 3.0e-42 175.6 169 52.7
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 6.8e-42 174.5 148 58.8
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 1.2e-41 173.7 181 50.3
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.2e-41 173.7 148 56.1
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 4.4e-41 171.8 179 50.8
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 4.4e-41 171.8 151 57.0
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 1.3e-40 170.2 158 54.4
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 1.8e-39 166.4 194 45.9
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.0e-38 162.9 150 54.0
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 1.6e-35 153.3 153 52.9
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 9.8e-33 144.1 140 51.4
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 1.4e-31 140.2 157 47.1
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 7.8e-30 134.4 135 49.6
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 8.6e-29 131.0 112 58.0
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 4.3e-28 128.6 115 55.7
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.2e-27 127.1 169 42.0
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 1.6e-27 126.7 156 41.7
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 2.8e-27 125.9 81 69.1
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 8.1e-27 124.4 81 66.7
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 4.7e-19 98.6 94 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.5e-17 93.6 92 52.2
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 1.9e-15 86.7 84 51.2
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.3e-13 79.7 74 52.7
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 7.3e-12 74.7 137 33.6
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 4.7e-11 72.0 55 58.2
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 1.4e-10 70.5 64 51.6
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 1.8e-10 70.1 62 51.6
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 1.1e-07 60.8 49 53.1
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 1.4e-07 60.5 39 61.5


User provided reference genes

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