Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 6.6e-282 973.4 498 100.0
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 8.5e-88 328.6 461 50.5
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 7.7e-81 305.4 440 48.6
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 3.4e-76 290.0 446 48.2
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 9.9e-36 155.6 265 43.0
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 4.9e-35 153.3 385 34.5
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.3e-24 117.9 410 30.7
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.0e-24 117.5 364 33.8
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 3.9e-24 117.1 419 32.5
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 3.9e-24 117.1 369 32.8
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 8.7e-24 115.9 456 31.8
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 4.3e-23 113.6 477 31.7
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 7.4e-23 112.8 471 32.3
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.3e-22 112.1 446 32.5
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 4.8e-22 110.2 475 31.4
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 3.1e-21 107.5 450 31.6
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 4.0e-21 107.1 454 29.5
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 5.3e-21 106.7 337 34.1
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 9.0e-21 105.9 443 31.2
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.2e-20 105.5 260 36.5
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.5e-20 105.1 443 31.4
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 2.6e-20 104.4 398 33.4
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 3.4e-20 104.0 139 46.8
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 5.8e-20 103.2 333 33.9
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 5.8e-20 103.2 359 33.4
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 5.8e-20 103.2 282 34.8
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.0e-19 102.4 311 32.8
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 1.3e-19 102.1 249 35.7
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 2.9e-19 100.9 265 35.8
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 2.9e-19 100.9 215 40.0
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 6.5e-19 99.8 433 30.0
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 8.4e-19 99.4 246 35.8
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 8.4e-19 99.4 194 40.7
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 1.4e-18 98.6 343 31.8
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 2.5e-18 97.8 129 47.3
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 5.5e-18 96.7 119 47.9
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 5.5e-18 96.7 245 37.6
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 5.5e-18 96.7 260 35.0
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 9.3e-18 95.9 257 34.6
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.2e-17 95.5 320 31.9
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 1.6e-17 95.1 189 41.8
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 1.6e-17 95.1 176 41.5
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.6e-17 95.1 372 32.0
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 2.7e-17 94.4 193 40.4
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.7e-17 94.4 378 31.7
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 2.7e-17 94.4 409 30.1
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 4.6e-17 93.6 203 39.4
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 4.6e-17 93.6 263 34.6
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 6.0e-17 93.2 328 33.8
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 6.0e-17 93.2 318 32.7
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.0e-17 93.2 373 30.6
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 7.9e-17 92.8 193 42.0
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.9e-17 92.8 390 31.8
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 7.9e-17 92.8 134 48.5
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.0e-16 92.4 459 27.9
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 1.3e-16 92.0 406 30.0
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.3e-16 92.0 315 34.3
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.3e-16 92.0 192 36.5
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 2.3e-16 91.3 363 32.2
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 3.0e-16 90.9 201 37.8
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.0e-16 90.9 387 29.2
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.0e-16 90.9 368 30.7
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 3.9e-16 90.5 377 28.9
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 5.1e-16 90.1 177 37.9
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 5.1e-16 90.1 173 42.2
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 6.7e-16 89.7 205 36.1
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 8.7e-16 89.4 391 31.2
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 1.1e-15 89.0 288 30.9
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 1.1e-15 89.0 280 32.5
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.5e-15 88.6 341 29.6
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.5e-15 88.6 430 28.6
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 1.5e-15 88.6 160 39.4
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.9e-15 88.2 393 29.8
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.5e-15 87.8 218 34.4
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.5e-15 87.8 212 37.3
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 3.3e-15 87.4 388 29.6
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 4.3e-15 87.0 332 30.7
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 4.3e-15 87.0 332 31.0
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 7.4e-15 86.3 212 38.2
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 9.6e-15 85.9 184 35.3
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 9.6e-15 85.9 310 31.6
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.3e-14 85.5 351 29.3
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.1e-14 84.7 161 38.5
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 2.1e-14 84.7 328 32.0
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 2.1e-14 84.7 319 31.7
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 2.8e-14 84.3 131 41.2
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 3.7e-14 84.0 132 45.5
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 3.7e-14 84.0 333 30.9
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 4.8e-14 83.6 144 41.0
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.4e-13 82.0 189 36.5
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.4e-13 82.0 363 28.4
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.4e-13 81.3 265 30.6
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 2.4e-13 81.3 394 29.4
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.4e-13 81.3 115 45.2
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.1e-13 80.9 278 29.5
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 3.1e-13 80.9 203 36.5
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 5.3e-13 80.1 148 37.2
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 1.2e-12 79.0 168 36.9
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.2e-12 79.0 205 34.6
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 1.5e-12 78.6 149 38.9
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 3.4e-12 77.4 144 38.9
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 4.5e-12 77.0 164 37.2
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 4.5e-12 77.0 83 51.8
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 7.6e-12 76.3 288 30.9
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 1.3e-11 75.5 144 38.9
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 1.3e-11 75.5 146 37.0
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.3e-11 75.5 191 34.0
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 1.7e-11 75.1 164 36.0
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 1.7e-11 75.1 164 36.0
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 2.2e-11 74.7 163 36.2
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 2.2e-11 74.7 163 34.4
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 2.2e-11 74.7 155 36.1
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 2.9e-11 74.3 366 32.0
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 6.5e-11 73.2 163 34.4
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 8.5e-11 72.8 163 34.4
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 8.5e-11 72.8 352 31.5
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 1.1e-10 72.4 126 38.1
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.1e-10 72.4 164 35.4
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.5e-10 71.2 294 30.6
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 9.3e-10 69.3 163 33.7
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 1.6e-09 68.6 119 38.7
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.1e-09 68.2 153 39.2
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 2.1e-09 68.2 101 40.6
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 7.9e-09 66.2 252 31.0
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.3e-08 65.5 340 28.8
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 6.7e-08 63.2 344 28.2
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 8.7e-08 62.8 159 37.7
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 1.9e-07 61.6 134 32.8
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.8e-06 57.8 376 28.2
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 6.3e-06 56.6 293 28.3


User provided reference genes

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