Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 9.3e-305 1049.3 490 100.0
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 3.3e-217 758.4 447 76.5
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 8.7e-202 707.2 459 70.4
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.1e-201 706.8 447 72.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 1.5e-201 706.4 439 73.1
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.3e-201 705.3 434 73.0
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.6e-201 704.5 435 73.6
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.3e-200 703.4 435 74.0
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.6e-200 703.0 444 71.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.6e-200 703.0 434 72.8
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.1e-200 702.6 438 72.4
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.8e-200 702.2 449 71.3
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.1e-199 700.3 438 72.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.1e-199 700.3 449 71.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-199 699.9 438 72.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 2.4e-199 699.1 445 71.9
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 3.1e-199 698.7 433 72.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 3.1e-199 698.7 450 70.2
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 3.1e-199 698.7 444 72.5
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.0e-199 698.4 438 72.1
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 4.0e-199 698.4 434 72.6
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 5.3e-199 698.0 441 71.7
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 6.9e-199 697.6 434 72.4
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 6.9e-199 697.6 453 70.9
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.0e-198 696.0 457 70.5
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 4.5e-198 694.9 465 69.0
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 4.5e-198 694.9 435 73.3
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 7.6e-198 694.1 434 71.9
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.3e-197 693.3 435 72.4
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.3e-197 693.3 449 71.3
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.7e-197 693.0 434 71.4
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.7e-197 693.0 433 72.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.9e-197 692.2 439 71.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 3.8e-197 691.8 436 74.3
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.8e-197 691.8 441 71.0
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 4.9e-197 691.4 433 72.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 6.5e-197 691.0 434 72.4
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.5e-196 689.1 434 71.2
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 3.2e-196 688.7 440 70.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 3.2e-196 688.7 440 71.1
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 3.2e-196 688.7 457 69.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 4.2e-196 688.3 436 71.3
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 7.1e-196 687.6 439 71.3
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.2e-195 686.8 438 70.8
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.6e-195 686.4 477 67.9
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.1e-195 686.0 441 71.0
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 2.1e-195 686.0 440 70.7
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.1e-195 686.0 438 70.8
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 2.1e-195 686.0 448 70.3
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.7e-195 685.6 435 72.4
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.7e-195 685.6 437 71.4
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 3.5e-195 685.3 433 72.1
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 4.6e-195 684.9 438 70.8
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 6.0e-195 684.5 434 71.4
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.0e-194 683.7 438 70.5
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.0e-194 683.7 441 69.8
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.0e-194 683.7 441 69.8
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.0e-194 683.7 432 71.5
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.0e-194 683.7 440 70.0
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.3e-194 683.3 440 70.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.3e-194 683.3 434 71.7
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.3e-194 683.3 439 70.2
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.3e-194 683.3 438 71.2
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 3.0e-194 682.2 438 70.3
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 3.0e-194 682.2 438 70.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 3.9e-194 681.8 435 71.3
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 5.1e-194 681.4 443 69.8
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.7e-194 681.0 434 71.7
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 8.7e-194 680.6 445 70.6
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.9e-193 679.5 433 70.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.5e-193 679.1 437 70.3
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.5e-193 679.1 434 71.0
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.3e-193 678.3 445 69.9
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 5.7e-193 677.9 435 71.3
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 7.4e-193 677.6 438 70.3
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.8e-192 675.6 437 69.8
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 6.2e-192 674.5 446 69.3
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.1e-191 673.7 433 69.7
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.4e-191 673.3 437 70.0
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.8e-191 672.9 430 70.7
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.2e-190 670.2 466 67.2
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 1.2e-190 670.2 437 70.0
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.5e-190 669.8 442 69.9
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 2.6e-190 669.1 470 65.5
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 2.6e-190 669.1 470 65.5
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 4.5e-190 668.3 436 69.5
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.9e-189 665.6 438 71.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.1e-187 659.4 474 65.6
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.3e-186 656.0 440 67.7
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 5.1e-186 654.8 447 67.3
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.3e-185 652.1 443 68.4
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 6.3e-184 647.9 460 66.7
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.4e-183 646.7 380 75.8
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 7.7e-182 641.0 378 74.9
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.4e-175 620.2 439 66.7
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 4.5e-174 615.1 477 60.8
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 7.2e-172 607.8 442 64.7
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 3.0e-162 575.9 399 66.9
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.8e-160 568.5 444 59.9
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.4e-159 566.2 438 61.9
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.0e-154 550.8 461 57.9
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 5.9e-150 535.0 438 58.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.2e-148 528.1 408 62.7
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.1e-135 487.6 377 61.0
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 7.0e-135 485.0 305 71.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.2e-134 484.2 321 69.2
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 3.6e-131 472.6 301 69.8
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 5.6e-124 448.7 282 72.0
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 5.4e-119 432.2 277 70.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 6.5e-72 275.8 194 68.0
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.1e-68 265.0 196 63.8
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.8e-66 257.7 168 69.0
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.3e-60 236.9 131 77.9
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.1e-58 231.9 133 73.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 3.9e-53 213.4 216 50.9
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 6.7e-53 212.6 134 70.1
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.1e-52 211.8 368 38.6
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.6e-52 210.7 133 70.7
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.9e-47 194.5 241 44.4
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.2e-43 179.1 121 68.6
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.5e-41 173.7 120 63.3
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 6.5e-40 169.5 125 60.0
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 8.5e-40 169.1 251 42.6
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 6.6e-24 116.3 93 58.1
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.4e-18 97.8 62 66.1
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 4.1e-18 97.1 62 66.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 7.0e-18 96.3 178 35.4
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.3e-16 91.3 78 55.1
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.6e-14 85.1 106 44.3
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.2e-13 80.1 83 47.0
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.6e-12 77.8 46 71.7
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 3.4e-12 77.4 61 65.6
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 8.3e-11 72.8 68 55.9


User provided reference genes

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