Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.1e-79 300.1 162 100.0
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 3.4e-17 92.4 81 54.3
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 7.5e-17 91.3 114 38.6
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.5e-12 77.0 165 33.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 7.2e-12 74.7 123 39.0
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 4.0e-10 68.9 122 32.8
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 5.2e-10 68.6 108 38.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.8e-10 68.2 110 36.4
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.8e-10 68.2 114 35.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 8.8e-10 67.8 110 32.7
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.2e-09 67.4 115 34.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.5e-09 67.0 124 30.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.5e-09 67.0 80 37.5
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.0e-09 66.6 135 27.4
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.0e-09 66.6 101 36.6
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.0e-09 66.6 84 38.1
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 2.0e-09 66.6 141 31.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.0e-09 66.6 115 35.7
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.6e-09 66.2 101 36.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.4e-09 65.9 108 37.0
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.4e-09 65.9 80 41.2
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.4e-09 65.5 107 37.4
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 5.7e-09 65.1 116 34.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.7e-09 65.1 76 38.2
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 5.7e-09 65.1 109 33.0
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 9.8e-09 64.3 73 42.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.3e-08 63.9 139 30.2
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.3e-08 63.9 101 35.6
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.3e-08 63.9 80 36.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.7e-08 63.5 117 32.5
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.7e-08 63.5 117 32.5
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.7e-08 63.5 115 33.9
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.7e-08 63.5 109 32.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.2e-08 63.2 103 32.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.2e-08 63.2 117 32.5
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.2e-08 63.2 117 32.5
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.2e-08 63.2 112 33.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.2e-08 63.2 117 32.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 2.8e-08 62.8 91 36.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.8e-08 62.8 103 32.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.8e-08 62.8 103 32.0
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.8e-08 62.8 140 30.0
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.8e-08 62.8 122 32.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-08 62.4 114 32.5
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 3.7e-08 62.4 101 33.7
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.9e-08 62.0 113 31.9
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 6.3e-08 61.6 80 38.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 6.3e-08 61.6 134 32.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 8.3e-08 61.2 110 33.6
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 8.3e-08 61.2 117 31.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.3e-08 61.2 109 33.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 8.3e-08 61.2 125 34.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 8.3e-08 61.2 78 38.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.1e-07 60.8 104 34.6
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-07 60.8 132 32.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.1e-07 60.8 132 32.6
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.1e-07 60.8 122 32.8
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.1e-07 60.8 127 32.3
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.4e-07 60.5 110 32.7
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.4e-07 60.5 103 35.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.4e-07 60.5 73 39.7
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.8e-07 60.1 134 31.3
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 2.4e-07 59.7 100 32.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.1e-07 59.3 69 39.1
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.1e-07 59.3 114 31.6
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.1e-07 59.3 148 31.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.1e-07 59.3 121 33.1
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 3.1e-07 59.3 139 33.1
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.1e-07 59.3 108 32.4
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 5.4e-07 58.5 80 32.5
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 5.4e-07 58.5 80 33.8
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 5.4e-07 58.5 126 30.2
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.4e-07 58.5 107 29.9
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 5.4e-07 58.5 130 29.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 7.0e-07 58.2 110 31.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 7.0e-07 58.2 135 34.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 7.0e-07 58.2 124 34.7
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 7.0e-07 58.2 110 30.9
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 9.2e-07 57.8 83 34.9
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-07 57.8 131 32.1
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-07 57.8 131 32.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 9.2e-07 57.8 134 30.6
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.2e-06 57.4 127 29.9
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.2e-06 57.4 100 33.0
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.2e-06 57.4 110 30.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.6e-06 57.0 129 30.2
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.6e-06 57.0 123 30.1
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.6e-06 57.0 122 30.3
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-06 57.0 113 30.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-06 57.0 113 29.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.6e-06 57.0 110 30.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 2.0e-06 56.6 114 31.6
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.0e-06 56.6 127 29.1
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.7e-06 56.2 110 30.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.5e-06 55.8 59 40.7
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 3.5e-06 55.8 114 35.1
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.5e-06 55.5 107 29.9
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 4.5e-06 55.5 122 27.9
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 4.5e-06 55.5 108 29.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 4.5e-06 55.5 127 26.8
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 5.9e-06 55.1 132 25.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 7.7e-06 54.7 122 27.9


User provided reference genes

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