Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 5.6e-75 284.3 150 100.0
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 2.8e-18 95.9 120 44.2
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 8.2e-18 94.4 119 47.1
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 4.1e-17 92.0 122 45.9
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 1.2e-16 90.5 127 43.3
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.5e-16 90.1 120 44.2
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 2.0e-16 89.7 113 44.2
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 5.9e-16 88.2 122 41.8
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 7.6e-16 87.8 144 41.0
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 1.3e-15 87.0 118 40.7
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 2.9e-15 85.9 138 42.8
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 2.9e-15 85.9 125 41.6
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 3.8e-15 85.5 121 40.5
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 3.8e-15 85.5 131 42.7
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 3.8e-15 85.5 142 38.7
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 8.5e-15 84.3 127 39.4
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 1.1e-14 84.0 136 37.5
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.1e-14 84.0 114 47.4
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.4e-14 83.6 131 40.5
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.4e-14 83.6 118 44.1
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 1.4e-14 83.6 127 40.9
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.9e-14 83.2 111 48.6
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.9e-14 83.2 119 42.0
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 2.5e-14 82.8 115 40.0
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 2.5e-14 82.8 134 41.0
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 3.2e-14 82.4 102 41.2
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 4.2e-14 82.0 71 57.7
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 4.2e-14 82.0 109 43.1
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 5.5e-14 81.6 141 38.3
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 5.5e-14 81.6 125 44.0
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 5.5e-14 81.6 133 42.9
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 5.5e-14 81.6 129 41.1
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 7.2e-14 81.3 123 39.0
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.2e-14 81.3 113 46.9
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.2e-14 81.3 113 46.9
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.2e-14 81.3 113 46.9
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.2e-14 81.3 113 46.9
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.2e-14 81.3 113 46.9
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 9.3e-14 80.9 126 43.7
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 9.3e-14 80.9 113 46.9
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 9.3e-14 80.9 113 46.9
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 9.3e-14 80.9 129 40.3
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 1.2e-13 80.5 119 43.7
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.2e-13 80.5 129 40.3
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 2.1e-13 79.7 100 43.0
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.1e-13 79.7 113 46.0
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 2.1e-13 79.7 124 44.4
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 2.7e-13 79.3 101 42.6
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 2.7e-13 79.3 117 45.3
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 3.6e-13 79.0 99 43.4
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 3.6e-13 79.0 115 42.6
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 4.6e-13 78.6 117 41.9
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.6e-13 78.6 113 46.0
SMO293G0007 Selaginella moellendorffii HOM05D005439 ORTHO05D006793 4.6e-13 78.6 73 53.4
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 4.6e-13 78.6 111 41.4
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 6.1e-13 78.2 70 54.3
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 6.1e-13 78.2 133 39.1
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 6.1e-13 78.2 113 46.0
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 7.9e-13 77.8 64 57.8
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 7.9e-13 77.8 109 44.0
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 1.0e-12 77.4 124 36.3
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 1.0e-12 77.4 124 36.3
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 1.0e-12 77.4 128 37.5
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.4e-12 77.0 99 44.4
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.4e-12 77.0 101 41.6
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.4e-12 77.0 118 43.2
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 1.4e-12 77.0 128 39.1
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 1.8e-12 76.6 108 39.8
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 2.3e-12 76.3 112 39.3
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 2.3e-12 76.3 112 43.8
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.3e-12 76.3 75 56.0
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 2.3e-12 76.3 124 38.7
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 3.0e-12 75.9 125 39.2
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 3.9e-12 75.5 99 43.4
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 3.9e-12 75.5 121 37.2
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 3.9e-12 75.5 108 38.0
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 5.1e-12 75.1 118 40.7
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 5.1e-12 75.1 117 43.6
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 5.1e-12 75.1 112 40.2
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 5.1e-12 75.1 134 39.6
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 6.7e-12 74.7 104 40.4
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 6.7e-12 74.7 104 40.4
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 6.7e-12 74.7 127 37.8
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.7e-12 74.7 113 46.0
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 8.8e-12 74.3 130 36.2
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.8e-12 74.3 120 44.2
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 8.8e-12 74.3 111 39.6
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 8.8e-12 74.3 83 44.6
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 1.1e-11 73.9 111 38.7
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 1.1e-11 73.9 104 40.4
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.5e-11 73.6 99 40.4
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 1.5e-11 73.6 122 36.1
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.5e-11 73.6 108 39.8
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.9e-11 73.2 116 43.1
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.9e-11 73.2 99 40.4
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 2.5e-11 72.8 132 36.4
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 3.3e-11 72.4 119 39.5
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.3e-11 72.4 112 43.8
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 3.3e-11 72.4 154 37.0
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 5.7e-11 71.6 139 35.3
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 7.4e-11 71.2 78 47.4
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 9.7e-11 70.9 113 44.2
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 1.3e-10 70.5 112 35.7
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 1.3e-10 70.5 131 35.1
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.2e-10 69.7 77 48.1
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 2.8e-10 69.3 101 37.6
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.7e-10 68.9 113 43.4
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 3.7e-10 68.9 143 34.3
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 8.2e-10 67.8 69 43.5
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 1.1e-09 67.4 124 40.3
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.1e-09 67.4 62 56.5
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 1.1e-09 67.4 121 38.0
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.8e-09 66.6 137 37.2
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 6.9e-09 64.7 131 34.4
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 2.2e-07 59.7 94 40.4
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 3.8e-07 58.9 118 38.1
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 8.5e-07 57.8 121 35.5
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.9e-06 56.6 85 43.5
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 3.2e-06 55.8 52 48.1
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 5.5e-06 55.1 115 35.7


User provided reference genes

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