Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 3.0e-34 147.9 72 100.0
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 3.7e-24 114.4 70 75.7
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 4.2e-20 100.9 69 63.8
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 2.7e-19 98.2 68 64.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 3.0e-18 94.7 68 60.3
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 3.9e-18 94.4 68 60.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 6.7e-18 93.6 68 60.3
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 8.7e-18 93.2 68 57.4
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-17 92.4 68 58.8
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-17 92.4 68 58.8
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.5e-17 92.4 68 58.8
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.5e-17 92.4 68 60.3
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.9e-17 92.0 68 54.4
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.9e-17 92.0 68 57.4
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.9e-17 92.0 68 57.4
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 1.9e-17 92.0 68 57.4
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 2.5e-17 91.7 68 57.4
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.3e-17 91.3 68 55.9
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 3.3e-17 91.3 68 57.4
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 3.3e-17 91.3 68 61.8
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 4.3e-17 90.9 69 56.5
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 4.3e-17 90.9 68 60.3
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 5.7e-17 90.5 68 54.4
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 5.7e-17 90.5 68 58.8
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 7.4e-17 90.1 68 52.9
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 7.4e-17 90.1 68 57.4
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 9.7e-17 89.7 68 57.4
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 9.7e-17 89.7 68 57.4
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 9.7e-17 89.7 68 60.3
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.6e-16 89.0 68 58.8
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.2e-16 88.6 68 54.4
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.2e-16 88.6 68 54.4
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 2.2e-16 88.6 68 57.4
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 2.2e-16 88.6 68 52.9
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 2.2e-16 88.6 68 57.4
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 2.8e-16 88.2 68 55.9
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 3.7e-16 87.8 64 62.5
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 3.7e-16 87.8 68 55.9
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 3.7e-16 87.8 68 57.4
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.7e-16 87.8 71 54.9
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.7e-16 87.8 71 54.9
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 4.8e-16 87.4 68 57.4
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 4.8e-16 87.4 67 59.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 4.8e-16 87.4 68 52.9
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 4.8e-16 87.4 77 54.5
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 4.8e-16 87.4 68 57.4
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.8e-16 87.4 68 58.8
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 6.3e-16 87.0 67 59.7
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 6.3e-16 87.0 68 51.5
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 8.2e-16 86.7 68 54.4
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 8.2e-16 86.7 68 54.4
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 1.1e-15 86.3 68 55.9
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.1e-15 86.3 68 52.9
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.1e-15 86.3 68 55.9
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.4e-15 85.9 67 56.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 1.4e-15 85.9 68 52.9
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.4e-15 85.9 68 54.4
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.8e-15 85.5 68 54.4
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.4e-15 85.1 68 52.9
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 2.4e-15 85.1 68 50.0
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.1e-15 84.7 68 52.9
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 3.1e-15 84.7 68 54.4
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 3.1e-15 84.7 68 54.4
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.1e-15 84.7 68 52.9
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.1e-15 84.7 68 51.5
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 4.1e-15 84.3 68 54.4
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 4.1e-15 84.3 68 54.4
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 4.1e-15 84.3 68 54.4
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 6.9e-15 83.6 68 51.5
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 6.9e-15 83.6 68 50.0
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 9.0e-15 83.2 68 51.5
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 9.0e-15 83.2 68 48.5
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 9.0e-15 83.2 68 51.5
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 9.0e-15 83.2 68 52.9
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 9.0e-15 83.2 68 52.9
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.2e-14 82.8 68 48.5
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.2e-14 82.8 68 52.9
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.5e-14 82.4 68 54.4
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 2.0e-14 82.0 68 51.5
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.0e-14 82.0 68 52.9
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 2.6e-14 81.6 61 59.0
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 4.5e-14 80.9 68 51.5
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 4.5e-14 80.9 68 51.5
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 4.5e-14 80.9 68 51.5
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 5.9e-14 80.5 68 50.0
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 5.9e-14 80.5 68 50.0
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.0e-13 79.7 67 52.2
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 2.2e-13 78.6 68 52.9
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 2.9e-13 78.2 68 51.5
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 3.8e-13 77.8 68 47.1
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 3.8e-13 77.8 68 48.5
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 5.0e-13 77.4 68 50.0
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 6.5e-13 77.0 68 50.0
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 6.5e-13 77.0 68 51.5
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 6.5e-13 77.0 68 51.5
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 8.5e-13 76.6 64 50.0
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 8.5e-13 76.6 68 51.5
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 1.9e-12 75.5 68 50.0
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 2.5e-12 75.1 68 45.6
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 5.5e-12 73.9 68 48.5
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.2e-11 72.8 68 48.5
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 1.2e-11 72.8 98 40.8
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 3.9e-10 67.8 69 42.0
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 3.9e-10 67.8 69 43.5
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 5.1e-10 67.4 69 44.9
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 5.1e-10 67.4 69 43.5
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 5.1e-10 67.4 69 42.0
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 1.5e-09 65.9 69 42.0
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 4.3e-09 64.3 66 43.9
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 7.4e-09 63.5 69 42.0


User provided reference genes

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