Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 9.6e-92 340.1 168 100.0
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 4.2e-23 112.1 115 47.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 4.7e-22 108.6 120 45.8
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 8.0e-22 107.8 116 44.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 8.0e-22 107.8 116 44.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.8e-21 106.7 116 44.8
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.8e-21 106.7 124 43.5
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.8e-21 106.7 125 41.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.3e-21 106.3 120 41.7
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 2.3e-21 106.3 105 46.7
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.0e-21 105.9 120 45.8
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 4.0e-21 105.5 125 42.4
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 5.2e-21 105.1 110 43.6
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.2e-21 105.1 121 42.1
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 6.8e-21 104.8 121 42.1
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.8e-21 104.8 121 42.1
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 8.8e-21 104.4 114 42.1
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.5e-20 103.6 109 44.0
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 2.0e-20 103.2 113 43.4
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 2.6e-20 102.8 124 43.5
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.4e-20 102.4 133 39.1
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 3.4e-20 102.4 113 47.8
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 3.4e-20 102.4 112 43.8
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 4.4e-20 102.1 127 40.9
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 4.4e-20 102.1 125 39.2
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 5.7e-20 101.7 123 43.1
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.7e-20 101.7 130 38.5
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 5.7e-20 101.7 129 39.5
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 7.5e-20 101.3 104 46.2
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 9.8e-20 100.9 114 41.2
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 9.8e-20 100.9 116 42.2
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.3e-19 100.5 113 43.4
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.3e-19 100.5 112 41.1
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.3e-19 100.5 116 40.5
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.7e-19 100.1 116 43.1
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.7e-19 100.1 117 44.4
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.7e-19 100.1 114 41.2
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.7e-19 100.1 112 42.0
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.2e-19 99.8 126 43.7
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.2e-19 99.8 114 42.1
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.2e-19 99.8 117 40.2
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 2.8e-19 99.4 126 43.7
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.8e-19 99.4 117 40.2
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 3.7e-19 99.0 117 41.0
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 3.7e-19 99.0 117 41.0
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 3.7e-19 99.0 117 41.0
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 3.7e-19 99.0 124 42.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 3.7e-19 99.0 120 42.5
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.9e-19 98.6 122 38.5
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 4.9e-19 98.6 122 40.2
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 6.3e-19 98.2 114 42.1
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.3e-19 98.2 105 42.9
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 8.3e-19 97.8 114 41.2
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 8.3e-19 97.8 118 40.7
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 8.3e-19 97.8 116 39.7
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 8.3e-19 97.8 116 44.0
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.1e-18 97.4 109 44.0
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-18 97.4 114 41.2
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-18 97.4 114 41.2
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.1e-18 97.4 119 35.3
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.1e-18 97.4 125 40.8
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.1e-18 97.4 111 43.2
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.4e-18 97.1 132 39.4
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.8e-18 96.7 112 39.3
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.4e-18 96.3 119 37.8
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 2.4e-18 96.3 114 43.0
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.1e-18 95.9 117 40.2
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.1e-18 95.9 114 40.4
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 4.1e-18 95.5 114 37.7
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 4.1e-18 95.5 108 40.7
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.4e-18 95.1 114 39.5
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.4e-18 95.1 115 38.3
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 5.4e-18 95.1 109 41.3
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 5.4e-18 95.1 109 41.3
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 7.0e-18 94.7 106 39.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 7.0e-18 94.7 117 38.5
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 7.0e-18 94.7 123 39.8
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.2e-18 94.4 114 38.6
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 9.2e-18 94.4 125 40.0
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 9.2e-18 94.4 125 40.0
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 9.2e-18 94.4 116 42.2
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 1.2e-17 94.0 112 37.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.2e-17 94.0 107 39.3
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.2e-17 94.0 114 39.5
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-17 94.0 107 40.2
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.2e-17 94.0 117 40.2
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.0e-17 93.2 123 35.8
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.0e-17 93.2 125 44.0
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.7e-17 92.8 105 41.9
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.7e-17 92.8 117 35.9
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 3.5e-17 92.4 107 39.3
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 5.9e-17 91.7 109 38.5
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 5.9e-17 91.7 118 38.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 7.7e-17 91.3 128 37.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 3.8e-16 89.0 66 54.5
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 6.6e-16 88.2 116 37.1
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 6.6e-16 88.2 107 38.3
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 6.6e-16 88.2 116 37.1
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 6.6e-16 88.2 116 37.9
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 8.6e-16 87.8 104 40.4
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-15 87.4 102 41.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.6e-14 83.6 156 32.1
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.8e-14 82.8 62 58.1
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.8e-13 80.1 155 30.3
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 4.0e-13 79.0 97 39.2
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.2e-12 77.4 65 50.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 2.6e-12 76.3 100 36.0
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 8.3e-11 71.2 94 36.2
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 4.1e-10 68.9 98 37.8
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.2e-09 67.4 112 28.6
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.2e-09 67.4 87 40.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 4.6e-09 65.5 88 36.4
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 4.7e-06 55.5 89 39.3


User provided reference genes

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