Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0047 Marchantia polymorpha HOM05D004879 ORTHO05D008271 1.3e-154 549.7 274 100.0
SEGI_07822 Sequoiadendron giganteum HOM05D004879 ORTHO05D008271 5.0e-74 282.0 222 59.0
Lj1P989T20 Lonicera japonica HOM05D004879 ORTHO05D008271 7.8e-67 258.1 224 54.5
Nitab4.5_0000832g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 1.7e-66 256.9 240 53.8
MBI13_g10954_MAGBIO Magnolia biondii HOM05D004879 ORTHO05D008271 2.3e-66 256.5 233 52.8
Psat0s4349g0080 Pisum sativum HOM05D004879 ORTHO05D008271 3.0e-66 256.1 233 52.4
TPR.G14628 Trifolium pratense HOM05D004879 ORTHO05D008271 3.0e-66 256.1 231 52.8
Psat0s2829g0160 Pisum sativum HOM05D004879 ORTHO05D008271 5.1e-66 255.4 233 51.9
DCAR_018145 Daucus carota HOM05D004879 ORTHO05D008271 6.6e-66 255.0 224 54.5
Solyc03g031430.1 Solanum lycopersicum HOM05D004879 ORTHO05D008271 8.6e-66 254.6 224 55.4
Sopen03g005320 Solanum pennellii HOM05D004879 ORTHO05D008271 8.6e-66 254.6 224 55.4
Nitab4.5_0005379g0030 Nicotiana tabacum HOM05D004879 ORTHO05D008271 1.9e-65 253.4 224 54.9
SMO137G0182 Selaginella moellendorffii HOM05D004879 ORTHO05D008271 1.9e-65 253.4 231 54.1
Peaxi162Scf00192g00042 Petunia axillaris HOM05D004879 ORTHO05D008271 2.5e-65 253.1 224 54.0
Haze_14485 Corylus avellana HOM05D004879 ORTHO05D008271 4.3e-65 252.3 225 52.4
Ca_06172_v3 Cicer arietinum L. HOM05D004879 ORTHO05D008271 5.6e-65 251.9 231 52.4
CAN.G1097.5 Capsicum annuum HOM05D004879 ORTHO05D008271 7.3e-65 251.5 224 54.5
PGSC0003DMG400024255 Solanum tuberosum HOM05D004879 ORTHO05D008271 7.3e-65 251.5 224 54.5
CiPaw.13G145200 Carya illinoinensis HOM05D004879 ORTHO05D008271 9.5e-65 251.1 231 51.1
Aqoxy1G01328 Aquilegia oxysepala HOM05D004879 ORTHO05D008271 1.6e-64 250.4 224 52.7
CsaV3_2G007030 Cucumis sativus L. HOM05D004879 ORTHO05D008271 1.6e-64 250.4 222 54.5
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.6e-64 250.4 231 51.5
LjContig00564g0012926 Lotus japonicus HOM05D004879 ORTHO05D008271 2.1e-64 250.0 231 52.4
AT1G21840 Arabidopsis thaliana HOM05D004879 ORTHO05D008271 2.8e-64 249.6 227 55.1
Cfa007603 Carpinus fangiana HOM05D004879 ORTHO05D008271 2.8e-64 249.6 225 52.0
Glyma.02G276400 Glycine max HOM05D004879 ORTHO05D008271 2.8e-64 249.6 224 54.0
Phvul.008G205100 Phaseolus vulgaris HOM05D004879 ORTHO05D008271 2.8e-64 249.6 222 54.1
Duzib041G0713 Durio zibethinus HOM05D004879 ORTHO05D008271 3.6e-64 249.2 224 53.6
Gorai.013G107000 Gossypium raimondii HOM05D004879 ORTHO05D008271 3.6e-64 249.2 225 52.0
Lalb_Chr04g0249461 Lupinus albus HOM05D004879 ORTHO05D008271 3.6e-64 249.2 224 54.0
Gohir.D03G062100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 4.7e-64 248.8 225 52.0
PSO384G4586 Papaver somniferum HOM05D004879 ORTHO05D008271 4.7e-64 248.8 224 53.1
PSO339G6668 Papaver somniferum HOM05D004879 ORTHO05D008271 6.2e-64 248.4 224 53.1
QL01p020549 Quercus lobata HOM05D004879 ORTHO05D008271 8.1e-64 248.1 223 52.9
Nn7g37079 Nelumbo nucifera HOM05D004879 ORTHO05D008271 1.4e-63 247.3 224 53.1
TWI79G1014 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 1.8e-63 246.9 227 53.3
Cc00_g20630 Coffea canephora HOM05D004879 ORTHO05D008271 2.4e-63 246.5 229 52.0
MELO3C004190.2 Cucumis melo HOM05D004879 ORTHO05D008271 2.4e-63 246.5 222 53.2
Glyma.14G039400 Glycine max HOM05D004879 ORTHO05D008271 3.1e-63 246.1 224 52.2
Potri.001G224400 Populus trichocarpa HOM05D004879 ORTHO05D008271 3.1e-63 246.1 231 50.2
Rhsim13G0203600 Rhododendron simsii HOM05D004879 ORTHO05D008271 3.1e-63 246.1 222 54.1
Ciclev10002295m.g Citrus clementina HOM05D004879 ORTHO05D008271 4.0e-63 245.7 224 54.5
Migut.F00393 Erythranthe guttata HOM05D004879 ORTHO05D008271 4.0e-63 245.7 222 53.2
Thhalv10009605m.g Eutrema salsugineum HOM05D004879 ORTHO05D008271 4.0e-63 245.7 228 52.2
Cpa.g.sc36.59 Carica papaya HOM05D004879 ORTHO05D008271 5.2e-63 245.4 227 51.5
RcHm_v2.0_Chr6g0250811 Rosa chinensis HOM05D004879 ORTHO05D008271 6.8e-63 245.0 224 51.8
Carub.0001s2129 Capsella rubella HOM05D004879 ORTHO05D008271 8.9e-63 244.6 227 53.3
Gohir.A02G109100 Gossypium hirsutum HOM05D004879 ORTHO05D008271 8.9e-63 244.6 224 51.3
VMungo0647G0171 Vigna mungo HOM05D004879 ORTHO05D008271 8.9e-63 244.6 224 52.7
Sed0013542 Sechium edule HOM05D004879 ORTHO05D008271 1.2e-62 244.2 224 51.8
AL1G35040 Arabidopsis lyrata HOM05D004879 ORTHO05D008271 1.5e-62 243.8 224 54.5
TWI31G0278 Tripterygium wilfordii HOM05D004879 ORTHO05D008271 1.5e-62 243.8 227 52.9
FvH4_2g00490 Fragaria vesca HOM05D004879 ORTHO05D008271 2.0e-62 243.4 224 51.3
CDE10G1192 Ceratophyllum demersum HOM05D004879 ORTHO05D008271 2.6e-62 243.0 224 50.9
AUR62000245 Chenopodium quinoa HOM05D004879 ORTHO05D008271 3.4e-62 242.7 227 53.3
Dinv15026 Davidia involucrata HOM05D004879 ORTHO05D008271 3.4e-62 242.7 224 51.8
BcaB08g37376 Brassica carinata HOM05D004879 ORTHO05D008271 5.8e-62 241.9 227 52.4
BcaB08g37377 Brassica carinata HOM05D004879 ORTHO05D008271 5.8e-62 241.9 227 52.4
CARHR022120 Cardamine hirsuta HOM05D004879 ORTHO05D008271 5.8e-62 241.9 222 53.6
Sc06g0004840 Simmondsia chinensis HOM05D004879 ORTHO05D008271 5.8e-62 241.9 222 52.7
EL10Ac4g10052 Beta vulgaris HOM05D004879 ORTHO05D008271 7.6e-62 241.5 225 53.3
Actinidia07011 Actinidia chinensis HOM05D004879 ORTHO05D008271 9.9e-62 241.1 240 52.1
Sabra16G0133100 Salix brachista HOM05D004879 ORTHO05D008271 9.9e-62 241.1 227 50.2
COL.COLO4_35490 Corchorus olitorius HOM05D004879 ORTHO05D008271 1.3e-61 240.7 243 50.6
BcaC06g34908 Brassica carinata HOM05D004879 ORTHO05D008271 2.2e-61 240.0 228 52.6
A07p14910 Brassica napus HOM05D004879 ORTHO05D008271 2.2e-61 240.0 228 52.6
C07p21890 Brassica napus HOM05D004879 ORTHO05D008271 2.2e-61 240.0 228 52.6
C07p21910 Brassica napus HOM05D004879 ORTHO05D008271 2.2e-61 240.0 228 52.6
BolC7t42723H Brassica oleracea HOM05D004879 ORTHO05D008271 2.2e-61 240.0 228 52.6
Eucgr.B03769 Eucalyptus grandis HOM05D004879 ORTHO05D008271 2.2e-61 240.0 224 51.8
RcHm_v2.0_Chr6g0250481 Rosa chinensis HOM05D004879 ORTHO05D008271 2.2e-61 240.0 224 51.3
BraA07t29233Z Brassica rapa HOM05D004879 ORTHO05D008271 2.9e-61 239.6 228 52.6
Sp1g19390 Schrenkiella parvula HOM05D004879 ORTHO05D008271 3.8e-61 239.2 222 53.2
Manes.01G175400 Manihot esculenta HOM05D004879 ORTHO05D008271 6.4e-61 238.4 224 50.0
Os02g0168000 Oryza sativa ssp. japonica HOM05D004879 ORTHO05D008271 6.4e-61 238.4 222 50.0
PGR102G1558 Punica granatum HOM05D004879 ORTHO05D008271 8.4e-61 238.0 231 49.8
ClCG02G014970 Citrullus lanatus HOM05D004879 ORTHO05D008271 1.4e-60 237.3 222 52.3
SGA_v2.0_scaffold2G01091 Striga asiatica HOM05D004879 ORTHO05D008271 5.4e-60 235.3 222 51.4
Aa31LG7G5930 Aethionema arabicum HOM05D004879 ORTHO05D008271 1.2e-59 234.2 230 50.4
HPP92_011765 Vanilla planifolia HOM05D004879 ORTHO05D008271 1.6e-59 233.8 227 50.2
ATR0782G197 Amborella trichopoda HOM05D004879 ORTHO05D008271 3.5e-59 232.6 225 49.8
unitig_37.g12512 Utricularia gibba HOM05D004879 ORTHO05D008271 1.0e-58 231.1 226 50.0
CANSAT54G0046 Cannabis sativa HOM05D004879 ORTHO05D008271 1.3e-58 230.7 232 51.3
ECA240G2819 Erigeron canadensis HOM05D004879 ORTHO05D008271 1.3e-58 230.7 218 51.4
FAN24G3181 Fragaria x ananassa HOM05D004879 ORTHO05D008271 1.3e-58 230.7 220 50.0
Zm00001eb232950 Zea mays HOM05D004879 ORTHO05D008271 1.3e-58 230.7 228 50.0
BcaC06g34909 Brassica carinata HOM05D004879 ORTHO05D008271 6.6e-58 228.4 228 51.8
Pp3c21_1390 Physcomitrium patens HOM05D004879 ORTHO05D008271 6.6e-58 228.4 231 52.4
CSS0042269 Camellia sinensis var. sinensis HOM05D004879 ORTHO05D008271 1.2e-56 224.2 224 50.0
MD10G1003100 Malus domestica HOM05D004879 ORTHO05D008271 1.6e-56 223.8 209 52.2
Atru.chr3.2942 Acer truncatum HOM05D004879 ORTHO05D008271 2.4e-55 219.9 191 54.5
FAN27G1110 Fragaria x ananassa HOM05D004879 ORTHO05D008271 1.2e-54 217.6 210 49.5
Prupe.8G030900 Prunus persica HOM05D004879 ORTHO05D008271 7.6e-54 214.9 203 51.2
CBR_g70735 Chara braunii HOM05D004879 ORTHO05D008271 3.5e-51 206.1 267 44.6
MSTRG.8775 Avicennia marina HOM05D004879 ORTHO05D008271 3.9e-50 202.6 228 46.9
MD12G1125200 Malus domestica HOM05D000005 ORTHO05D000012 3.3e-49 199.5 236 44.1
SalBow4G0907 Salvia bowleyana HOM05D004879 ORTHO05D008271 3.6e-48 196.1 196 50.0
FAN06G1945 Fragaria x ananassa HOM05D004879 ORTHO05D008271 2.4e-47 193.4 194 48.5
MD12G1125400 Malus domestica HOM05D004879 ORTHO05D008271 3.9e-42 176.0 200 45.5
Hma1.2p1_1843F.1_g305050 Hydrangea macrophylla HOM05D004879 ORTHO05D008271 6.7e-42 175.3 170 50.6
Thecc.08G138700 Theobroma cacao HOM05D004879 ORTHO05D008271 1.5e-41 174.1 151 54.3
arahy.Tifrunner.gnm1.ann1.WGUK12 Arachis hypogaea HOM05D004879 ORTHO05D008271 1.0e-34 151.4 234 38.0
arahy.Tifrunner.gnm1.ann1.V07RCD Arachis hypogaea HOM05D004879 ORTHO05D008271 1.8e-34 150.6 234 39.3
HPP92_011772 Vanilla planifolia HOM05D004879 ORTHO05D008271 1.8e-34 150.6 155 47.1
CBR_g27954 Chara braunii HOM05D004879 ORTHO05D008271 2.3e-34 150.2 170 48.8
RcHm_v2.0_Chr1g0323071 Rosa chinensis HOM05D004879 ORTHO05D008271 1.6e-32 144.1 138 48.6
MCO04G443 Micromonas commoda HOM05D004879 ORTHO05D008271 4.5e-30 136.0 264 36.4
RcHm_v2.0_Chr1g0322261 Rosa chinensis HOM05D004879 ORTHO05D008271 6.5e-29 132.1 124 48.4
SHI10553 Sapria himalayana HOM05D004879 ORTHO05D008271 1.3e-24 117.9 224 30.8
Oeu030259.1 Olea europaea HOM05D004879 ORTHO05D008271 6.3e-24 115.5 222 32.4
GSVIVG01037361001 Vitis vinifera HOM05D004879 ORTHO05D008271 9.0e-23 111.7 231 30.3
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 7.6e-22 108.6 198 35.9
Actinidia37185 Actinidia chinensis HOM05D004879 ORTHO05D008271 5.0e-21 105.9 196 34.2
FAN24G2371 Fragaria x ananassa HOM05D004879 ORTHO05D000038 4.1e-15 86.3 113 39.8
RcHm_v2.0_Chr1g0322441 Rosa chinensis HOM05D004879 ORTHO05D008271 4.1e-15 86.3 80 47.5
RcHm_v2.0_Chr1g0322591 Rosa chinensis HOM05D004879 ORTHO05D008271 1.5e-09 67.8 63 52.4
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 2.6e-09 67.0 208 29.8
RcHm_v2.0_Chr1g0322581 Rosa chinensis HOM05D004879 ORTHO05D008271 9.7e-09 65.1 70 45.7
RcHm_v2.0_Chr1g0322271 Rosa chinensis HOM05D004879 ORTHO05D008271 1.4e-07 61.2 63 47.6


User provided reference genes

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