Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 0.0e+00 5258.3 2683 100.0
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 4.1e-136 491.5 947 34.3
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 1.7e-126 459.5 906 36.0
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 5.0e-118 431.4 914 32.9
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 1.0e-94 354.0 1292 27.0
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 4.3e-93 348.6 959 29.6
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 9.9e-90 337.4 902 29.2
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 9.9e-90 337.4 895 29.5
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 6.4e-89 334.7 893 29.1
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 3.2e-88 332.4 901 29.5
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 3.5e-87 328.9 912 29.3
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 6.0e-87 328.2 892 28.8
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 1.3e-86 327.0 898 29.6
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 1.3e-86 327.0 893 28.2
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 2.3e-86 326.2 890 30.1
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 6.6e-86 324.7 915 29.6
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.1e-85 323.9 904 28.3
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 1.1e-85 323.9 934 29.1
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 1.9e-85 323.2 908 29.0
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 3.3e-85 322.4 912 29.1
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 3.3e-85 322.4 892 29.6
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 7.4e-85 321.2 890 28.3
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 7.4e-85 321.2 932 28.3
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 2.1e-84 319.7 887 29.2
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 6.2e-84 318.2 897 29.3
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.2e-84 318.2 903 28.1
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 6.2e-84 318.2 937 28.9
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 8.1e-84 317.8 908 27.4
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 1.8e-83 316.6 890 29.0
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.4e-83 316.2 904 28.2
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 2.4e-83 316.2 909 28.8
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 2.4e-83 316.2 923 28.9
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 6.9e-83 314.7 908 28.1
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 9.0e-83 314.3 905 28.2
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 1.5e-82 313.5 892 28.0
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 2.6e-82 312.8 888 28.3
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 2.6e-82 312.8 904 28.7
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 2.6e-82 312.8 909 27.6
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 2.6e-82 312.8 897 27.8
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 5.8e-82 311.6 910 28.0
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.8e-82 311.6 904 28.0
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 5.8e-82 311.6 914 28.8
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 9.9e-82 310.8 899 27.5
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 9.9e-82 310.8 899 27.5
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 9.9e-82 310.8 902 28.8
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 9.9e-82 310.8 891 29.3
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 2.2e-81 309.7 914 28.7
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 2.9e-81 309.3 902 27.3
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 2.9e-81 309.3 905 28.3
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 3.8e-81 308.9 901 27.6
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 4.9e-81 308.5 907 28.6
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 8.4e-81 307.8 911 28.8
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 8.4e-81 307.8 889 29.8
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.1e-80 307.4 888 29.2
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 1.9e-80 306.6 898 28.2
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 2.4e-80 306.2 897 28.8
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 2.4e-80 306.2 888 28.8
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 4.2e-80 305.4 726 30.7
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 1.2e-79 303.9 892 26.9
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 7.9e-79 301.2 897 28.0
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 5.1e-78 298.5 893 29.1
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 1.5e-77 297.0 984 26.8
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 1.9e-77 296.6 892 27.4
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.5e-77 296.2 760 29.7
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 4.3e-77 295.4 877 27.7
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 7.4e-77 294.7 891 28.8
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 1.3e-76 293.9 903 28.2
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 1.6e-76 293.5 906 27.2
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 2.8e-76 292.7 877 28.1
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 3.7e-76 292.4 681 30.4
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 8.1e-76 291.2 898 29.4
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.4e-75 290.4 734 30.0
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 3.1e-75 289.3 886 29.2
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 3.1e-75 289.3 902 26.3
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 5.3e-75 288.5 1193 25.7
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 5.3e-75 288.5 894 28.6
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.2e-74 287.3 910 27.4
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 1.3e-73 283.9 654 29.5
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 1.3e-73 283.9 554 33.4
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 8.4e-73 281.2 896 26.5
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 3.2e-72 279.3 674 29.4
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 1.1e-69 270.8 732 29.0
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 4.3e-69 268.9 1012 26.0
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 2.1e-68 266.5 895 28.6
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 1.2e-66 260.8 930 27.3
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 4.5e-66 258.8 893 27.2
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 5.9e-66 258.5 914 27.6
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 2.9e-65 256.1 939 26.7
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 1.4e-64 253.8 988 26.2
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 5.5e-64 251.9 888 27.4
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 1.6e-63 250.4 909 26.8
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.0e-62 247.7 763 28.7
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 6.7e-62 245.0 926 26.1
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 2.4e-59 236.5 927 26.9
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 5.3e-59 235.3 892 27.4
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 2.0e-58 233.4 893 25.9
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.2e-55 224.2 751 26.6
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.0e-49 202.2 627 27.8
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 1.4e-48 200.7 726 25.8
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 9.1e-43 181.4 664 25.6
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.0e-41 175.6 412 29.1
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 1.5e-40 174.1 494 29.1
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 4.2e-40 172.6 417 29.3
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 7.2e-40 171.8 529 28.4
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 7.7e-34 151.8 270 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2798 Anthoceros agrestis HOM05D006083 ORTHO05D007634 9.8e-29 134.8 353 32.3
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 3.7e-20 106.3 392 26.0
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.0e-09 71.6 120 34.2
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 1.3e-09 71.2 97 37.1
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 7.3e-08 65.5 92 34.8


User provided reference genes

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