Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0020 Marchantia polymorpha HOM05D004889 ORTHO05D005478 2.2e-159 566.6 586 100.0
Pp3c4_160 Physcomitrium patens HOM05D004889 ORTHO05D005478 4.4e-83 313.2 597 62.3
SEGI_11308 Sequoiadendron giganteum HOM05D004889 ORTHO05D005478 7.2e-78 295.8 590 57.5
Manes.14G073400 Manihot esculenta HOM05D004889 ORTHO05D005478 2.6e-75 287.3 608 48.4
Lj5A118T73 Lonicera japonica HOM05D004889 ORTHO05D005478 1.7e-74 284.6 592 48.1
Sed0007285 Sechium edule HOM05D004889 ORTHO05D005478 1.7e-74 284.6 589 53.7
TAR039G0004 Trochodendron aralioides HOM05D004889 ORTHO05D005478 2.2e-74 284.3 588 52.6
TAR629G1437 Trochodendron aralioides HOM05D004889 ORTHO05D005478 2.2e-74 284.3 588 52.6
CsaV3_1G008010 Cucumis sativus L. HOM05D004889 ORTHO05D005478 8.3e-74 282.3 592 45.9
MELO3C002218.2 Cucumis melo HOM05D004889 ORTHO05D005478 1.1e-73 282.0 592 46.8
Dinv19901 Davidia involucrata HOM05D004889 ORTHO05D005478 2.4e-73 280.8 165 88.5
TAR640G0002 Trochodendron aralioides HOM05D004889 ORTHO05D005478 5.4e-73 279.6 591 47.5
TAR622G0909 Trochodendron aralioides HOM05D004889 ORTHO05D005478 9.1e-73 278.9 165 87.9
ATR0712G167 Amborella trichopoda HOM05D004889 ORTHO05D005478 2.0e-72 277.7 593 51.8
CSS0046467 Camellia sinensis var. sinensis HOM05D004889 ORTHO05D005478 2.7e-72 277.3 166 88.0
Ciclev10019625m.g Citrus clementina HOM05D004889 ORTHO05D005478 3.5e-72 276.9 597 54.6
Nn4g22998 Nelumbo nucifera HOM05D004889 ORTHO05D005478 3.5e-72 276.9 608 43.8
PGSC0003DMG400033066 Solanum tuberosum HOM05D004889 ORTHO05D005478 4.5e-72 276.6 586 44.9
Gohir.A07G065700 Gossypium hirsutum HOM05D004889 ORTHO05D005478 5.9e-72 276.2 162 88.3
TWI60G0433 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 5.9e-72 276.2 598 48.5
vmacro16573 Vaccinium macrocarpon HOM05D004889 ORTHO05D005478 1.0e-71 275.4 165 86.7
CDE12G0348 Ceratophyllum demersum HOM05D004889 ORTHO05D005478 1.7e-71 274.6 165 87.3
VMungo1215G2590 Vigna mungo HOM05D004889 ORTHO05D005478 2.3e-71 274.2 161 88.2
Aqoxy3G00822 Aquilegia oxysepala HOM05D004889 ORTHO05D005478 2.9e-71 273.9 165 87.3
Manes.06G097700 Manihot esculenta HOM05D004889 ORTHO05D005478 2.9e-71 273.9 588 48.8
Rhsim12G0159900 Rhododendron simsii HOM05D004889 ORTHO05D005478 2.9e-71 273.9 587 48.2
arahy.Tifrunner.gnm1.ann1.78U3A7 Arachis hypogaea HOM05D004889 ORTHO05D005478 5.0e-71 273.1 161 87.6
arahy.Tifrunner.gnm1.ann1.9HIF7S Arachis hypogaea HOM05D004889 ORTHO05D005478 5.0e-71 273.1 161 87.6
Phvul.003G194500 Phaseolus vulgaris HOM05D004889 ORTHO05D005478 5.0e-71 273.1 600 50.0
SalBow5G2608 Salvia bowleyana HOM05D004889 ORTHO05D005478 5.0e-71 273.1 603 48.6
Nn3g17093 Nelumbo nucifera HOM05D004889 ORTHO05D005478 6.5e-71 272.7 162 87.0
MD06G1185300 Malus domestica HOM05D004889 ORTHO05D005478 8.6e-71 272.3 165 86.7
CAN.G628.53 Capsicum annuum HOM05D004889 ORTHO05D005478 1.1e-70 271.9 602 47.2
MBI04_g18038_MAGBIO Magnolia biondii HOM05D004889 ORTHO05D005478 1.5e-70 271.6 593 53.6
Potri.015G090200 Populus trichocarpa HOM05D004889 ORTHO05D005478 1.5e-70 271.6 165 85.5
Dinv38643 Davidia involucrata HOM05D004889 ORTHO05D005478 2.5e-70 270.8 590 50.2
Ca_21861_v3 Cicer arietinum L. HOM05D004889 ORTHO05D005478 3.3e-70 270.4 590 50.8
MSTRG.23064 Avicennia marina HOM05D004889 ORTHO05D005478 4.2e-70 270.0 160 87.5
CANSAT80G0562 Cannabis sativa HOM05D004889 ORTHO05D005478 4.2e-70 270.0 584 46.4
Actinidia04935 Actinidia chinensis HOM05D004889 ORTHO05D005478 5.5e-70 269.6 161 87.0
Lj4g0007492 Lotus japonicus HOM05D004889 ORTHO05D005478 5.5e-70 269.6 165 84.8
Prupe.5G184200 Prunus persica HOM05D004889 ORTHO05D005478 5.5e-70 269.6 587 53.3
AUR62027699 Chenopodium quinoa HOM05D004889 ORTHO05D005478 7.2e-70 269.2 165 84.2
Glyma.05G031100 Glycine max HOM05D004889 ORTHO05D005478 7.2e-70 269.2 592 48.1
Sabra15G0112400 Salix brachista HOM05D004889 ORTHO05D005478 7.2e-70 269.2 165 85.5
HPP92_012530 Vanilla planifolia HOM05D004889 ORTHO05D005478 7.2e-70 269.2 589 50.3
Duzib084G1322 Durio zibethinus HOM05D004889 ORTHO05D005478 9.5e-70 268.9 589 50.3
EL10Ac8g20579 Beta vulgaris HOM05D004889 ORTHO05D005478 1.6e-69 268.1 165 84.8
ClCG01G014310 Citrullus lanatus HOM05D004889 ORTHO05D005478 2.1e-69 267.7 606 48.8
Sopen06g027440 Solanum pennellii HOM05D004889 ORTHO05D005478 2.1e-69 267.7 584 50.2
Hma1.2p1_3047F.1_g332110 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 2.8e-69 267.3 589 49.9
PGR083G1434 Punica granatum HOM05D004889 ORTHO05D005478 2.8e-69 267.3 161 87.6
RcHm_v2.0_Chr7g0180311 Rosa chinensis HOM05D004889 ORTHO05D005478 3.6e-69 266.9 165 84.8
Potri.012G093000 Populus trichocarpa HOM05D004889 ORTHO05D005478 4.7e-69 266.5 585 46.3
Sed0005054 Sechium edule HOM05D004889 ORTHO05D005478 4.7e-69 266.5 586 51.7
Hund21165 Selenicereus undatus HOM05D004889 ORTHO05D005478 4.7e-69 266.5 165 84.2
Solyc06g071140.3 Solanum lycopersicum HOM05D004889 ORTHO05D005478 6.1e-69 266.2 584 49.8
Os07g0192900 Oryza sativa ssp. japonica HOM05D004889 ORTHO05D005478 8.0e-69 265.8 168 83.3
Eucgr.B00394 Eucalyptus grandis HOM05D004889 ORTHO05D005478 1.0e-68 265.4 590 48.8
HanXRQChr09g0271391 Helianthus annuus HOM05D004889 ORTHO05D005478 1.8e-68 264.6 165 85.5
Psat4g054400 Pisum sativum HOM05D004889 ORTHO05D005478 1.8e-68 264.6 160 85.0
PSO161G0045 Papaver somniferum HOM05D004889 ORTHO05D005478 2.3e-68 264.2 593 50.6
Thecc.03G076300 Theobroma cacao HOM05D004889 ORTHO05D005478 2.3e-68 264.2 162 85.8
Duzib205G1395 Durio zibethinus HOM05D004889 ORTHO05D005478 3.0e-68 263.8 592 53.9
GSVIVG01008085001 Vitis vinifera HOM05D004889 ORTHO05D005478 3.0e-68 263.8 600 45.5
COL.COLO4_33419 Corchorus olitorius HOM05D004889 ORTHO05D005478 4.0e-68 263.5 165 84.2
Duzib068G1437 Durio zibethinus HOM05D004889 ORTHO05D005478 4.0e-68 263.5 589 48.2
CiPaw.11G036000 Carya illinoinensis HOM05D004889 ORTHO05D005478 6.8e-68 262.7 585 49.7
FvH4_5g15820 Fragaria vesca HOM05D004889 ORTHO05D005478 6.8e-68 262.7 607 45.8
FAN08G0221 Fragaria x ananassa HOM05D002295 ORTHO05D002789 6.8e-68 262.7 600 43.8
FAN18G0072 Fragaria x ananassa HOM05D002295 ORTHO05D002789 6.8e-68 262.7 165 83.6
Gohir.D07G070200 Gossypium hirsutum HOM05D004889 ORTHO05D005478 6.8e-68 262.7 594 50.7
Gorai.001G074100 Gossypium raimondii HOM05D004889 ORTHO05D005478 1.2e-67 261.9 594 50.8
PSO478G3716 Papaver somniferum HOM05D004889 ORTHO05D005478 1.2e-67 261.9 593 52.3
Lsat_1_v5_gn_4_105560 Lactuca sativa HOM05D004889 ORTHO05D005478 2.0e-67 261.2 165 86.1
SGA_v2.0_scaffold56G20073 Striga asiatica HOM05D004889 ORTHO05D005478 2.0e-67 261.2 160 85.0
Migut.I00111 Erythranthe guttata HOM05D004889 ORTHO05D005478 2.6e-67 260.8 590 47.6
FAN13G0367 Fragaria x ananassa HOM05D004889 ORTHO05D005478 1.3e-66 258.5 597 45.6
QL03p038490 Quercus lobata HOM05D004889 ORTHO05D005478 1.7e-66 258.1 611 54.8
Lalb_Chr13g0298111 Lupinus albus HOM05D004889 ORTHO05D005478 2.2e-66 257.7 165 82.4
Peaxi162Scf00496g00012 Petunia axillaris HOM05D004889 ORTHO05D005478 3.7e-66 256.9 586 48.5
Nitab4.5_0003744g0020 Nicotiana tabacum HOM05D004889 ORTHO05D005478 1.1e-65 255.4 165 80.6
Lalb_Chr07g0182371 Lupinus albus HOM05D004889 ORTHO05D005478 9.2e-65 252.3 596 53.5
Medtr4g107410 Medicago truncatula HOM05D004889 ORTHO05D005478 9.2e-65 252.3 164 79.9
Haze_07757 Corylus avellana HOM05D004889 ORTHO05D005478 2.0e-64 251.1 595 48.1
TWI81G0893 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 4.5e-64 250.0 161 82.6
unitig_0.g784 Utricularia gibba HOM05D004889 ORTHO05D005478 7.8e-64 249.2 170 77.6
Nitab4.5_0000026g0250 Nicotiana tabacum HOM05D004889 ORTHO05D005478 1.0e-63 248.8 606 47.0
THA.LOC104818246 Tarenaya hassleriana HOM05D004889 ORTHO05D005478 1.3e-63 248.4 167 80.2
TPR.G38450 Trifolium pratense HOM05D004889 ORTHO05D005478 2.3e-63 247.7 164 79.9
Sabra12G0067700 Salix brachista HOM05D004889 ORTHO05D005478 6.6e-63 246.1 577 44.4
Cc04_g15980 Coffea canephora HOM05D004889 ORTHO05D005478 8.6e-63 245.7 166 79.5
Oeu022615.1 Olea europaea HOM05D004889 ORTHO05D005478 2.5e-62 244.2 154 83.1
AUR62031228 Chenopodium quinoa HOM05D004889 ORTHO05D005478 3.3e-62 243.8 622 42.4
MD14G1191200 Malus domestica HOM05D004889 ORTHO05D005478 9.5e-62 242.3 594 48.3
Nitab4.5_0003595g0020 Nicotiana tabacum HOM05D004889 ORTHO05D005478 1.2e-61 241.9 594 49.0
CBR_g4762 Chara braunii HOM05D004889 ORTHO05D005478 2.1e-61 241.1 154 81.8
ECA232G4768 Erigeron canadensis HOM05D000153 ORTHO05D000118 3.0e-60 237.3 596 45.1
CDE01G0549 Ceratophyllum demersum HOM05D004889 ORTHO05D005478 1.2e-59 235.3 602 49.7
Cpa.g.sc17.179 Carica papaya HOM05D004889 ORTHO05D005478 7.5e-59 232.6 561 51.2
Hma1.2p1_3047F.1_g332100 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 1.7e-55 221.5 589 44.0
Carub.0008s2340 Capsella rubella HOM05D004889 ORTHO05D005478 3.0e-55 220.7 598 41.6
AT5G62640 Arabidopsis thaliana HOM05D004889 ORTHO05D005478 3.3e-54 217.2 167 71.9
Aa31LG4G16530 Aethionema arabicum HOM05D004889 ORTHO05D005478 3.6e-53 213.8 631 42.9
AL8G39620 Arabidopsis lyrata HOM05D004889 ORTHO05D005478 6.2e-53 213.0 598 46.7
HPP92_012535 Vanilla planifolia HOM05D004889 ORTHO05D005478 1.8e-52 211.5 591 44.8
BcaC01g02501 Brassica carinata HOM05D004889 ORTHO05D005478 3.1e-52 210.7 167 71.9
A06p29350 Brassica napus HOM05D004889 ORTHO05D005478 3.1e-52 210.7 160 74.4
BcaB02g09670 Brassica carinata HOM05D004889 ORTHO05D005478 4.0e-52 210.3 160 73.1
C03p64130 Brassica napus HOM05D004889 ORTHO05D005478 5.8e-51 206.5 593 44.5
BcaB02g09666 Brassica carinata HOM05D004889 ORTHO05D005478 3.7e-50 203.8 599 43.4
BraA06t25888Z Brassica rapa HOM05D004889 ORTHO05D005478 2.4e-49 201.1 174 68.4
Sp2g25820 Schrenkiella parvula HOM05D004889 ORTHO05D005478 5.0e-47 193.4 599 44.9
CARHR276450 Cardamine hirsuta HOM05D004889 ORTHO05D005478 8.6e-47 192.6 592 37.7
BolC3t18668H Brassica oleracea HOM05D004889 ORTHO05D005478 7.3e-46 189.5 636 38.2
SMO351G0326 Selaginella moellendorffii HOM05D004889 ORTHO05D005478 2.6e-43 181.0 586 34.3
DCAR_016527 Daucus carota HOM05D004889 ORTHO05D005478 4.1e-41 173.7 616 40.9
Actinidia37670 Actinidia chinensis HOM05D004889 ORTHO05D005478 7.8e-40 169.5 105 81.9
Ah.09g233410 Amaranthus hybridus HOM05D004889 ORTHO05D005478 3.0e-39 167.5 544 39.3
Medtr4g107420 Medicago truncatula HOM05D004889 ORTHO05D005478 8.1e-37 159.5 110 78.2
Medtr0444s0010 Medicago truncatula HOM05D004889 ORTHO05D005478 5.8e-35 153.3 121 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3309 Anthoceros agrestis HOM05D004889 ORTHO05D005478 1.3e-31 142.1 515 52.6
Atru.chr9.2345 Acer truncatum HOM05D004889 ORTHO05D005478 2.1e-29 134.8 505 43.0
CARHR156590 Cardamine hirsuta HOM05D004889 ORTHO05D005478 8.1e-29 132.9 540 36.1
Zm00001eb302650 Zea mays HOM05D004889 ORTHO05D005478 1.2e-24 119.0 81 70.4
Gohir.A11G028540 Gossypium hirsutum HOM05D004889 ORTHO05D005478 1.7e-23 115.2 73 76.7
Hma1.2p1_0104F.1_g050430 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 3.9e-23 114.0 73 78.1
Sc12g0006090 Simmondsia chinensis HOM05D004889 ORTHO05D005478 8.7e-23 112.8 494 37.9
Nitab4.5_0000003g0080 Nicotiana tabacum HOM05D004889 ORTHO05D005478 8.1e-21 106.3 104 54.8
Thhalv10003972m.g Eutrema salsugineum HOM05D004889 ORTHO05D005478 1.2e-19 102.4 101 59.4
Glyma.17G095700 Glycine max HOM05D004889 ORTHO05D005478 1.2e-19 102.4 100 61.0
Oeu022609.1 Olea europaea HOM05D004889 ORTHO05D005478 1.2e-19 102.4 97 60.8
unitig_0.g785 Utricularia gibba HOM05D004889 ORTHO05D005478 1.5e-19 102.1 97 62.9
Hma1.2p1_0104F.1_g050420 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 2.6e-19 101.3 64 84.4
BcaB02g09669 Brassica carinata HOM05D004889 ORTHO05D005478 7.6e-19 99.8 93 61.3
HanXRQChr12g0361591 Helianthus annuus HOM05D004889 ORTHO05D005478 9.9e-19 99.4 101 58.4
Cre07.g348700 Chlamydomonas reinhardtii HOM05D004889 ORTHO05D005478 2.9e-18 97.8 164 40.2
Actinidia37671 Actinidia chinensis HOM05D004889 ORTHO05D005478 4.2e-17 94.0 99 56.6
arahy.Tifrunner.gnm1.ann1.KJ948Q Arachis hypogaea HOM05D004889 ORTHO05D005478 7.1e-17 93.2 103 58.3
SEGI_30438 Sequoiadendron giganteum HOM05D004889 ORTHO05D005478 9.3e-17 92.8 101 55.4
Zm00001eb116440 Zea mays HOM05D004889 ORTHO05D005478 3.5e-16 90.9 100 57.0
arahy.Tifrunner.gnm1.ann1.GYQ60G Arachis hypogaea HOM05D004889 ORTHO05D005478 9.6e-14 82.8 58 82.8
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 4.0e-12 77.4 86 54.7
SEGI_10816 Sequoiadendron giganteum HOM05D004889 ORTHO05D005478 5.3e-12 77.0 46 82.6
SEGI_38811 Sequoiadendron giganteum HOM05D010422 ORTHO05D005478 1.5e-06 58.9 83 45.8
SEGI_30705 Sequoiadendron giganteum HOM05D010422 ORTHO05D005478 1.9e-06 58.5 81 49.4
CiPaw.12G005400 Carya illinoinensis HOM05D004889 ORTHO05D005478 3.3e-06 57.8 71 54.9
CiPaw.12G005600 Carya illinoinensis HOM05D004889 ORTHO05D005478 3.3e-06 57.8 71 54.9
SEGI_10093 Sequoiadendron giganteum HOM05D010422 ORTHO05D005478 5.6e-06 57.0 81 46.9
Carub.0005s1400 Capsella rubella HOM05D004889 ORTHO05D016590 7.4e-06 56.6 60 68.3


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