Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 2.7e-233 811.6 397 100.0
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 9.9e-63 245.0 318 42.5
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 4.6e-60 236.1 387 37.7
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 1.7e-59 234.2 387 38.2
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 5.1e-59 232.6 378 37.8
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 6.6e-59 232.3 281 47.0
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 1.5e-58 231.1 263 48.3
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.9e-58 230.7 369 39.3
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 3.3e-58 229.9 266 45.1
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 4.3e-58 229.6 277 46.2
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 2.8e-57 226.9 293 43.0
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 2.8e-57 226.9 361 39.1
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 4.8e-57 226.1 379 37.2
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.4e-56 224.6 286 44.4
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 1.8e-56 224.2 258 48.4
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 4.0e-56 223.0 253 48.6
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 4.0e-56 223.0 294 44.2
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 4.0e-56 223.0 273 45.1
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 5.3e-56 222.6 277 44.4
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 5.3e-56 222.6 301 43.9
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 5.3e-56 222.6 388 38.1
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 5.3e-56 222.6 274 46.7
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 6.9e-56 222.2 275 44.0
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 9.0e-56 221.9 374 37.2
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.2e-55 221.5 289 44.3
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 1.2e-55 221.5 252 47.6
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.5e-55 221.1 299 43.5
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.5e-55 221.1 299 43.5
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.5e-55 221.1 270 46.3
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.5e-55 221.1 306 45.1
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 2.6e-55 220.3 255 49.0
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 3.4e-55 219.9 264 45.8
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 4.5e-55 219.5 378 38.1
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 4.5e-55 219.5 390 36.4
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 7.6e-55 218.8 382 36.6
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 7.6e-55 218.8 306 44.1
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 9.9e-55 218.4 306 44.1
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 9.9e-55 218.4 376 37.8
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.3e-54 218.0 306 42.2
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 1.7e-54 217.6 287 44.3
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 2.2e-54 217.2 388 36.6
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 2.9e-54 216.9 379 36.4
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 3.8e-54 216.5 304 41.8
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 3.8e-54 216.5 299 44.8
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 3.8e-54 216.5 381 38.1
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 3.8e-54 216.5 269 44.2
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 3.8e-54 216.5 279 45.2
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 4.9e-54 216.1 274 43.1
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 4.9e-54 216.1 293 44.4
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 4.9e-54 216.1 383 36.8
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 4.9e-54 216.1 265 44.2
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.4e-54 215.7 329 42.6
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 8.4e-54 215.3 293 43.7
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 8.4e-54 215.3 366 37.7
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.1e-53 214.9 250 47.6
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.1e-53 214.9 317 43.5
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 1.4e-53 214.5 280 44.3
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 3.2e-53 213.4 264 44.3
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 4.2e-53 213.0 273 46.9
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 9.3e-53 211.8 412 36.4
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.2e-52 211.5 274 44.5
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 1.2e-52 211.5 278 42.1
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.2e-52 211.5 257 43.6
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 4.6e-52 209.5 371 36.1
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 4.6e-52 209.5 272 44.5
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 6.0e-52 209.1 270 43.7
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 7.9e-52 208.8 310 40.0
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 3.0e-51 206.8 265 42.6
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.1e-50 204.9 276 42.4
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 5.6e-50 202.6 290 40.0
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 5.6e-50 202.6 251 45.4
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 7.4e-50 202.2 262 42.4
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 7.4e-50 202.2 260 44.6
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 9.6e-50 201.8 146 66.4
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.3e-49 201.4 262 45.0
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.6e-49 201.1 266 44.0
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 3.7e-49 199.9 261 43.7
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 4.8e-49 199.5 145 66.2
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.1e-48 198.4 275 41.1
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.8e-48 197.6 334 37.1
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.5e-47 194.5 273 40.7
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 2.0e-47 194.1 386 34.5
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 2.0e-47 194.1 275 42.5
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 1.1e-45 188.3 293 43.0
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 2.5e-42 177.2 365 34.0
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 7.4e-42 175.6 370 34.3
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 9.6e-42 175.3 122 59.8
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 9.0e-40 168.7 261 40.2
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 1.5e-39 167.9 112 67.0
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 2.6e-39 167.2 139 57.6
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 2.9e-38 163.7 102 67.6
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 5.0e-38 162.9 116 65.5
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 5.5e-37 159.5 318 34.6
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.6e-36 157.9 116 62.1
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.3e-35 154.1 103 61.2
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 8.7e-35 152.1 328 33.2
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 4.3e-34 149.8 95 66.3
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 8.2e-33 145.6 272 35.3
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 8.2e-33 145.6 260 37.7
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 3.4e-31 140.2 221 38.9
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 4.5e-31 139.8 332 32.8
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 1.0e-30 138.7 132 50.8
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 1.1e-29 135.2 305 33.1
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 9.4e-29 132.1 207 37.2
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 3.6e-28 130.2 318 28.6
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.8e-27 127.9 85 67.1
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.0e-23 114.4 111 53.2
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 7.2e-21 105.9 190 33.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 1.6e-20 104.8 336 28.0
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.1e-20 104.4 68 58.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 9.1e-16 89.0 66 65.2
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 2.9e-14 84.0 102 39.2
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 2.9e-14 84.0 102 39.2
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 3.2e-13 80.5 60 55.0
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 3.2e-13 80.5 52 63.5
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 3.2e-13 80.5 184 33.7
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 1.6e-12 78.2 50 66.0
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 4.7e-12 76.6 57 54.4
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 6.7e-11 72.8 49 57.1
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 2.0e-10 71.2 49 55.1
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 2.2e-09 67.8 169 31.4
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 4.5e-07 60.1 100 35.0
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 4.5e-07 60.1 190 28.4
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 2.9e-06 57.4 153 32.7
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 5.0e-06 56.6 279 23.7


User provided reference genes

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