Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 2.7e-70 268.5 128 100.0
Mapoly0031s0012 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.4e-29 133.3 73 84.9
Mapoly0031s0017 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.4e-29 133.3 73 84.9
Mapoly0211s0009 Marchantia polymorpha HOM05D000782 ORTHO05D000571 8.8e-29 130.6 95 69.5
Mapoly0211s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 8.8e-29 130.6 73 82.2
Mapoly0031s0022 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.3e-28 128.6 95 68.4
Mapoly0211s0003 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.6e-22 108.6 66 78.8
Mapoly0001s0475 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.5e-20 103.2 73 64.4
Mapoly0031s0010 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.7e-19 98.6 58 81.0
Mapoly0211s0011 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.7e-16 89.7 72 56.9
Mapoly0031s0002 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.8e-16 88.6 72 55.6
Mapoly0031s0018 Marchantia polymorpha HOM05D000782 ORTHO05D000571 8.5e-16 87.4 101 43.6
Mapoly0211s0007 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.5e-15 86.7 72 55.6
Mapoly0184s0026 Marchantia polymorpha HOM05D000782 ORTHO05D000571 2.5e-15 85.9 96 47.9
Thhalv10014621m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 7.0e-10 67.8 133 30.8
Sp6g41010 Schrenkiella parvula HOM05D000782 ORTHO05D000571 7.0e-10 67.8 133 31.6
Aa31LG1G23400 Aethionema arabicum HOM05D000782 ORTHO05D000571 1.2e-09 67.0 133 29.3
BraA03t09400Z Brassica rapa HOM05D000782 ORTHO05D000571 1.6e-09 66.6 135 29.6
BcaC03g13089 Brassica carinata HOM05D000782 ORTHO05D000571 2.0e-09 66.2 132 29.5
Duzib138G0029 Durio zibethinus HOM05D000782 ORTHO05D000571 3.5e-09 65.5 120 28.3
BcaB01g06251 Brassica carinata HOM05D000782 ORTHO05D000571 5.9e-09 64.7 133 30.1
C02p00070 Brassica napus HOM05D000782 ORTHO05D000571 5.9e-09 64.7 132 29.5
BraA02t04679Z Brassica rapa HOM05D000782 ORTHO05D000571 5.9e-09 64.7 132 29.5
Carub.0006s0008 Capsella rubella HOM05D000782 ORTHO05D000571 5.9e-09 64.7 133 28.6
CARHR113130 Cardamine hirsuta HOM05D000782 ORTHO05D000571 5.9e-09 64.7 133 29.3
AL6G10280 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 1.3e-08 63.5 133 28.6
Aa31LG1G23410 Aethionema arabicum HOM05D000782 ORTHO05D000571 1.7e-08 63.2 132 30.3
AT5G01750 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 1.7e-08 63.2 133 27.1
Lj2A64T52 Lonicera japonica HOM05D000782 ORTHO05D000571 6.5e-08 61.2 99 33.3
THA.LOC104823312 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 6.5e-08 61.2 134 27.6
Thhalv10026215m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 8.5e-08 60.8 94 34.0
Actinidia29055 Actinidia chinensis HOM05D000782 ORTHO05D000571 2.5e-07 59.3 127 26.8
Thhalv10025938m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 3.2e-07 58.9 69 39.1
Cfa017085 Carpinus fangiana HOM05D000782 ORTHO05D000571 4.2e-07 58.5 93 35.5
Nn2g11064 Nelumbo nucifera HOM05D000782 ORTHO05D000571 4.2e-07 58.5 127 26.8
Actinidia32553 Actinidia chinensis HOM05D000782 ORTHO05D000571 7.2e-07 57.8 127 22.8
CiPaw.10G162500 Carya illinoinensis HOM05D000782 ORTHO05D000571 7.2e-07 57.8 93 32.3
AL1G48330 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 9.4e-07 57.4 127 30.7
Carub.0002s2182 Capsella rubella HOM05D000782 ORTHO05D000571 9.4e-07 57.4 128 26.6
Ciclev10013687m.g Citrus clementina HOM05D000782 ORTHO05D000571 1.2e-06 57.0 128 24.2
Duzib268G1165 Durio zibethinus HOM05D000782 ORTHO05D000571 1.6e-06 56.6 127 24.4
Solyc09g014820.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 1.6e-06 56.6 97 27.8
Thecc.04G157300 Theobroma cacao HOM05D000782 ORTHO05D000571 1.6e-06 56.6 132 28.0
Prupe.6G287500 Prunus persica HOM05D000782 ORTHO05D000571 2.1e-06 56.2 126 26.2
BcaB01g06118 Brassica carinata HOM05D000782 ORTHO05D000571 2.7e-06 55.8 133 27.1
A03p00110 Brassica napus HOM05D000782 ORTHO05D000571 2.7e-06 55.8 133 27.1
C03p00260 Brassica napus HOM05D000782 ORTHO05D000571 2.7e-06 55.8 133 27.1
BolC3t12602H Brassica oleracea HOM05D000782 ORTHO05D000571 2.7e-06 55.8 133 27.1
ECA236G0580 Erigeron canadensis HOM05D000782 ORTHO05D000571 2.7e-06 55.8 134 28.4
FAN05G5695 Fragaria x ananassa HOM05D000782 ORTHO05D000571 2.7e-06 55.8 127 25.2
Aqoxy4G00262 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 3.6e-06 55.5 127 24.4
HanXRQChr15g0463441 Helianthus annuus HOM05D000002 ORTHO05D000571 3.6e-06 55.5 127 24.4
CAN.G738.2 Capsicum annuum HOM05D000782 ORTHO05D000571 4.7e-06 55.1 127 26.0
CARHR258060 Cardamine hirsuta HOM05D000782 ORTHO05D000571 4.7e-06 55.1 133 27.8
Ciclev10012677m.g Citrus clementina HOM05D000782 ORTHO05D000571 4.7e-06 55.1 68 32.4
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 4.7e-06 55.1 94 29.8
DCAR_028905 Daucus carota HOM05D000782 ORTHO05D000571 4.7e-06 55.1 93 29.0
Duzib268G0853 Durio zibethinus HOM05D000782 ORTHO05D000571 4.7e-06 55.1 127 22.8
Thhalv10026191m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 4.7e-06 55.1 126 28.6
Phvul.008G089000 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 6.1e-06 54.7 132 25.0
Sopen09g007770 Solanum pennellii HOM05D000782 ORTHO05D000571 6.1e-06 54.7 97 26.8
Aqoxy4G00264 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 8.0e-06 54.3 127 24.4
AT2G14560 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 8.0e-06 54.3 127 26.0
CARHR212110 Cardamine hirsuta HOM05D000782 ORTHO05D000571 8.0e-06 54.3 133 26.3
PGR031G3631 Punica granatum HOM05D000782 ORTHO05D000571 8.0e-06 54.3 128 25.8


User provided reference genes

Program Settings