Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0073s0090 Marchantia polymorpha HOM05D020694 ORTHO05D010692 0.0e+00 1579.7 876 100.0
Mapoly0106s0013 Marchantia polymorpha HOM05D020694 ORTHO05D010692 2.3e-68 265.0 772 29.7
Mapoly0093s0005 Marchantia polymorpha HOM05D020694 ORTHO05D010692 1.6e-61 242.3 805 28.2
Mapoly0095s0062 Marchantia polymorpha HOM05D020694 ORTHO05D010692 1.9e-54 218.8 726 29.1
Mapoly0112s0037 Marchantia polymorpha HOM05D020694 ORTHO05D010692 3.2e-38 164.9 632 27.7
Mapoly0044s0055 Marchantia polymorpha HOM05D020694 ORTHO05D010692 6.6e-15 87.4 129 38.8
SEGI_11429 Sequoiadendron giganteum HOM05D008797 ORTHO05D010692 5.2e-12 77.8 404 24.5
ATR1156G084 Amborella trichopoda HOM05D008797 ORTHO05D010692 3.4e-11 75.1 438 23.5
Atru.chr1.3067 Acer truncatum HOM05D008797 ORTHO05D010692 9.8e-11 73.6 276 26.1
QL05p027942 Quercus lobata HOM05D008797 ORTHO05D010692 8.3e-10 70.5 339 25.7
Os02g0203500 Oryza sativa ssp. japonica HOM05D008797 ORTHO05D010692 1.4e-09 69.7 324 23.8
CSS0016456 Camellia sinensis var. sinensis HOM05D008797 ORTHO05D010692 2.4e-09 68.9 407 23.1
CiPaw.02G155100 Carya illinoinensis HOM05D008797 ORTHO05D010692 2.4e-09 68.9 436 23.2
MBI01_g37817_MAGBIO Magnolia biondii HOM05D008797 ORTHO05D010692 3.2e-09 68.6 319 27.3
Cfa001998 Carpinus fangiana HOM05D008797 ORTHO05D010692 5.4e-09 67.8 292 26.0
Hma1.2p1_0317F.1_g123660 Hydrangea macrophylla HOM05D008797 ORTHO05D010692 7.0e-09 67.4 292 24.3
GSVIVG01017273001 Vitis vinifera HOM05D008797 ORTHO05D010692 1.2e-08 66.6 300 26.3
Cpa.g.sc10.227 Carica papaya HOM05D008797 ORTHO05D010692 2.7e-08 65.5 288 24.7
Ciclev10024782m.g Citrus clementina HOM05D008797 ORTHO05D010692 2.7e-08 65.5 291 25.1
TAR626G1961 Trochodendron aralioides HOM05D008797 ORTHO05D010692 2.7e-08 65.5 292 24.3
Dinv30575 Davidia involucrata HOM05D008797 ORTHO05D010692 7.8e-08 63.9 180 26.7
Thecc.06G070900 Theobroma cacao HOM05D008797 ORTHO05D010692 7.8e-08 63.9 181 27.6
Zm00001eb205560 Zea mays HOM05D008797 ORTHO05D010692 1.0e-07 63.5 330 24.5
FvH4_6g30240 Fragaria vesca HOM05D008797 ORTHO05D010692 1.3e-07 63.2 433 21.7
Prupe.3G081300 Prunus persica HOM05D008797 ORTHO05D010692 1.3e-07 63.2 177 25.4
COL.COLO4_12913 Corchorus olitorius HOM05D008797 ORTHO05D010692 2.3e-07 62.4 392 23.5
SMO203G0225 Selaginella moellendorffii HOM05D008797 ORTHO05D010692 2.3e-07 62.4 300 26.7
FAN02G3669 Fragaria x ananassa HOM05D008797 ORTHO05D010692 3.0e-07 62.0 291 24.1
RcHm_v2.0_Chr2g0136481 Rosa chinensis HOM05D008797 ORTHO05D010692 3.0e-07 62.0 178 24.7
Potri.001G172300 Populus trichocarpa HOM05D008797 ORTHO05D010692 5.0e-07 61.2 292 24.0
Potri.003G062100 Populus trichocarpa HOM05D008797 ORTHO05D010692 5.0e-07 61.2 292 23.6
Duzib235G1077 Durio zibethinus HOM05D008797 ORTHO05D010692 6.6e-07 60.8 288 25.3
FAN14G3291 Fragaria x ananassa HOM05D008797 ORTHO05D010692 6.6e-07 60.8 181 24.9
Sabra01G0139500 Salix brachista HOM05D008797 ORTHO05D010692 3.3e-06 58.5 292 23.6
arahy.Tifrunner.gnm1.ann1.MS9PXH Arachis hypogaea HOM05D000005 ORTHO05D000012 5.6e-06 57.8 344 24.1
Ah.09g233740 Amaranthus hybridus HOM05D000011 ORTHO05D000157 9.5e-06 57.0 268 25.0


User provided reference genes

Program Settings