Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 4.4e-139 498.0 271 100.0
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 3.5e-75 285.8 200 67.5
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 7.7e-67 258.1 174 71.8
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 7.7e-67 258.1 174 71.8
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 1.0e-66 257.7 167 73.7
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.0e-66 257.7 187 67.9
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 1.7e-66 256.9 178 69.7
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 2.2e-66 256.5 181 67.4
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 2.2e-66 256.5 155 73.5
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 2.2e-66 256.5 168 71.4
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 3.8e-66 255.8 179 69.8
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 3.8e-66 255.8 182 68.7
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 8.5e-66 254.6 182 67.6
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.1e-65 254.2 158 75.3
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.1e-65 254.2 158 75.3
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.1e-65 254.2 178 69.1
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.5e-65 253.8 166 73.5
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.5e-65 253.8 182 67.6
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.9e-65 253.4 186 67.7
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.9e-65 253.4 169 71.0
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 3.2e-65 252.7 167 71.3
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 3.2e-65 252.7 169 71.6
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 5.5e-65 251.9 165 72.1
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 5.5e-65 251.9 167 72.5
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 9.4e-65 251.1 158 74.1
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 9.4e-65 251.1 181 66.9
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 2.1e-64 250.0 158 73.4
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 2.7e-64 249.6 166 70.5
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.7e-64 249.6 167 72.5
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 3.6e-64 249.2 185 67.6
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 3.6e-64 249.2 157 74.5
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 3.6e-64 249.2 157 74.5
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 3.6e-64 249.2 196 62.8
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.6e-64 249.2 175 69.1
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 4.7e-64 248.8 162 72.2
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 6.1e-64 248.4 161 71.4
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 1.4e-63 247.3 209 61.2
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.4e-63 247.3 203 62.1
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 1.4e-63 247.3 165 72.1
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 1.8e-63 246.9 194 62.9
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.3e-63 246.5 162 72.8
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 3.0e-63 246.1 187 64.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 4.0e-63 245.7 158 74.1
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 4.0e-63 245.7 174 69.5
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 4.0e-63 245.7 174 67.8
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 5.2e-63 245.4 200 64.5
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 8.8e-63 244.6 158 72.2
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.2e-62 244.2 184 64.7
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 1.2e-62 244.2 158 72.2
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.5e-62 243.8 191 64.4
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 1.5e-62 243.8 195 61.0
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.5e-62 243.8 185 67.0
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 2.0e-62 243.4 186 63.4
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 2.6e-62 243.0 166 69.3
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 4.4e-62 242.3 155 71.6
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 7.5e-62 241.5 158 70.9
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 7.5e-62 241.5 159 69.8
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 7.5e-62 241.5 158 69.6
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 9.8e-62 241.1 160 69.4
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 9.8e-62 241.1 217 59.9
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 9.8e-62 241.1 171 67.3
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 9.8e-62 241.1 158 70.9
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.3e-61 240.7 219 58.0
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 1.7e-61 240.4 157 70.7
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.7e-61 240.4 157 70.7
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.7e-61 240.4 157 70.7
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 2.2e-61 240.0 163 71.2
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.8e-61 239.6 171 65.5
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 2.8e-61 239.6 157 70.7
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 8.3e-61 238.0 157 71.3
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 1.8e-60 236.9 183 63.9
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 5.4e-60 235.3 179 63.7
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 7.0e-60 235.0 163 66.9
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 9.1e-60 234.6 186 64.0
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 2.0e-59 233.4 162 68.5
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 2.7e-59 233.0 153 69.3
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 7.7e-59 231.5 209 57.4
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.9e-57 226.9 169 66.3
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 5.5e-57 225.3 156 67.3
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 9.5e-57 224.6 173 64.7
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 9.5e-57 224.6 159 66.0
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.6e-56 223.8 159 65.4
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 3.6e-56 222.6 186 60.2
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 4.7e-56 222.2 192 60.9
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 4.7e-56 222.2 188 59.6
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.0e-55 221.1 199 56.3
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 2.3e-55 219.9 186 59.7
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 2.3e-55 219.9 186 59.7
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 2.3e-55 219.9 186 59.7
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 3.0e-55 219.5 186 59.1
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 8.9e-55 218.0 195 57.4
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 8.9e-55 218.0 195 57.4
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 3.4e-54 216.1 180 61.7
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 4.4e-54 215.7 197 58.9
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 7.5e-54 214.9 188 59.6
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 7.8e-51 204.9 178 59.0
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 8.6e-50 201.4 192 56.2
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.3e-49 199.5 149 65.1
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.2e-45 186.8 119 70.6
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.7e-42 177.2 105 78.1
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 6.6e-42 175.3 124 65.3
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 5.2e-39 165.6 144 59.0
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 8.9e-39 164.9 119 63.0
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.7e-37 159.5 157 52.2
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.6e-32 144.1 210 39.5
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 1.4e-28 131.0 186 44.1
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.6e-16 90.9 166 39.2
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 4.0e-15 86.3 105 43.8
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.2e-13 80.5 44 81.8
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.6e-11 74.3 41 80.5


User provided reference genes

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