Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 7.5e-183 643.7 311 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 5.6e-138 494.6 313 75.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.9e-124 447.6 313 68.7
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.1e-120 437.2 299 69.2
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 4.3e-114 415.2 308 65.9
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 7.4e-114 414.5 310 64.2
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 8.2e-113 411.0 310 63.9
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 4.1e-112 408.7 305 64.3
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 6.9e-112 407.9 288 66.7
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 3.4e-111 405.6 303 63.7
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 3.4e-111 405.6 300 65.0
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 5.9e-111 404.8 310 64.2
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.0e-110 404.1 300 64.7
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.7e-110 403.3 303 63.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.7e-110 403.3 300 64.7
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.7e-110 403.3 293 66.9
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.9e-110 402.5 309 63.1
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 5.0e-110 401.7 305 63.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 6.5e-110 401.4 306 64.1
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 8.5e-110 401.0 297 64.0
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-109 400.6 305 63.3
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 3.2e-109 399.1 309 63.1
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 3.2e-109 399.1 305 63.0
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.2e-109 399.1 305 63.0
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.2e-109 399.1 303 62.7
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 7.2e-109 397.9 305 61.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 7.2e-109 397.9 305 62.3
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 9.4e-109 397.5 310 61.9
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.2e-108 397.1 287 65.5
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.1e-108 396.4 287 65.9
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 2.1e-108 396.4 308 61.4
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.6e-108 395.2 305 62.6
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 7.9e-108 394.4 302 61.9
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.4e-107 393.7 291 64.9
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.4e-107 393.7 305 62.3
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.3e-107 392.9 309 61.5
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 5.1e-107 391.7 308 60.4
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 5.1e-107 391.7 293 65.2
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 6.7e-107 391.3 261 71.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 3.3e-106 389.0 305 61.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 4.3e-106 388.7 302 61.6
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 7.4e-106 387.9 281 66.5
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.3e-105 387.1 281 66.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.4e-104 383.6 288 63.2
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.1e-104 382.5 288 62.8
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 4.1e-104 382.1 288 62.8
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 4.1e-104 382.1 291 64.6
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 5.3e-104 381.7 302 60.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 6.9e-104 381.3 316 60.8
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 9.1e-104 380.9 288 62.5
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.2e-103 380.6 288 62.5
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.2e-103 380.6 320 59.4
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.2e-103 380.6 297 63.3
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-103 380.2 315 59.7
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.5e-103 380.2 308 61.7
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.0e-103 379.8 289 62.3
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.0e-103 379.8 289 62.3
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.6e-103 379.4 288 62.5
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 4.5e-103 378.6 276 65.6
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 4.5e-103 378.6 276 65.2
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 5.9e-103 378.3 288 62.5
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.3e-102 377.1 280 63.9
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.3e-102 377.1 312 60.9
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.3e-102 377.1 312 60.9
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.3e-102 377.1 292 63.4
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-102 376.7 288 62.2
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.7e-102 376.7 288 62.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.7e-102 376.7 288 62.2
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.7e-102 376.7 311 61.1
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.4e-101 373.6 305 61.0
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 2.3e-99 366.3 309 58.3
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.9e-99 365.5 278 62.9
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 5.1e-99 365.2 289 58.8
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.3e-96 355.1 357 52.4
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 9.1e-96 354.4 287 61.7
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.5e-95 353.6 262 65.6
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.0e-94 350.9 312 56.7
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.9e-94 349.4 309 58.9
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.8e-91 340.1 307 56.7
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 3.9e-91 339.0 238 67.2
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.3e-89 334.0 241 66.0
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.3e-89 334.0 277 61.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.7e-89 333.6 297 57.6
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 4.8e-89 332.0 305 55.4
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 1.8e-88 330.1 413 45.5
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.0e-87 326.6 232 67.2
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.5e-87 325.5 243 62.6
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.2e-86 323.2 275 57.5
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.1e-85 320.9 313 51.8
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 7.2e-85 318.2 252 60.7
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 4.7e-84 315.5 334 51.5
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 6.1e-84 315.1 261 59.0
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 8.0e-84 314.7 312 51.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.4e-83 313.9 218 66.5
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.9e-77 293.5 276 55.4
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 8.0e-76 288.1 242 59.5
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.8e-75 287.0 308 49.4
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.0e-75 286.2 198 67.7
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.3e-70 270.8 262 53.8
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.2e-64 249.6 301 44.5
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 1.2e-60 237.7 189 57.1
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.8e-59 233.8 325 43.7
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 5.2e-59 232.3 634 29.0
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 4.9e-57 225.7 230 52.2
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 4.7e-52 209.1 198 55.6
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 9.2e-48 194.9 154 61.0
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 6.0e-47 192.2 154 58.4
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-46 191.4 198 53.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.9e-45 187.2 156 59.6
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 4.4e-42 176.0 237 45.1
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-40 171.0 188 46.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.4e-40 171.0 278 38.1
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.9e-40 170.6 288 39.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-37 161.4 146 54.8
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 7.3e-37 158.7 273 35.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.4e-35 153.7 131 58.8
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 2.7e-31 140.2 359 29.8
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 8.7e-30 135.2 90 67.8
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.1e-27 128.3 114 52.6
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.5e-26 124.4 99 56.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 5.1e-22 109.4 80 63.8
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.7e-09 67.8 62 46.8
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.5e-07 60.1 47 61.7


User provided reference genes

Program Settings