Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 2.5e-214 748.4 358 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 4.6e-83 312.4 344 48.8
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 3.7e-77 292.7 301 49.2
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 4.3e-65 252.7 251 48.2
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 9.9e-62 241.5 264 45.5
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.7e-61 240.7 254 47.6
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 6.4e-61 238.8 254 46.5
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 7.1e-60 235.3 249 46.2
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 2.1e-59 233.8 248 47.6
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 4.6e-59 232.6 309 39.8
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 6.0e-59 232.3 273 45.4
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.3e-58 231.1 280 44.3
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.3e-58 231.1 249 46.6
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 3.0e-58 229.9 249 46.2
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.0e-58 229.9 252 46.4
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 3.9e-58 229.6 248 44.8
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 5.1e-58 229.2 249 45.8
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 6.6e-58 228.8 250 46.0
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 8.7e-58 228.4 249 45.4
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.1e-57 228.0 264 43.6
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 1.9e-57 227.3 249 45.4
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.9e-57 227.3 248 44.4
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.5e-57 226.9 259 44.4
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 3.3e-57 226.5 254 46.1
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 4.3e-57 226.1 254 44.5
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 5.6e-57 225.7 249 45.0
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 7.3e-57 225.3 260 44.2
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 7.3e-57 225.3 252 45.6
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 9.6e-57 224.9 256 44.5
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 9.6e-57 224.9 253 44.7
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.6e-56 224.2 258 43.8
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.1e-56 223.8 256 44.5
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.8e-56 223.4 271 42.1
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 3.6e-56 223.0 263 44.5
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 3.6e-56 223.0 249 44.2
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.6e-56 223.0 252 43.3
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 4.7e-56 222.6 253 44.3
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 4.7e-56 222.6 259 44.0
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 6.2e-56 222.2 259 44.4
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 8.1e-56 221.9 249 43.8
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.1e-55 221.5 249 44.6
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.1e-55 221.5 272 40.8
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.1e-55 221.5 249 45.4
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.4e-55 221.1 258 43.4
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.4e-55 221.1 288 39.9
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.8e-55 220.7 258 43.0
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 3.1e-55 219.9 280 41.4
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 4.0e-55 219.5 246 47.6
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 5.2e-55 219.2 253 42.7
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 6.9e-55 218.8 252 43.7
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 6.9e-55 218.8 280 40.7
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.2e-54 218.0 254 43.3
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.2e-54 218.0 258 43.4
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.2e-54 218.0 236 44.5
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.5e-54 217.6 242 45.0
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.5e-54 217.6 236 44.5
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 2.6e-54 216.9 264 43.2
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.6e-54 216.9 236 43.6
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 7.6e-54 215.3 250 45.2
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 7.6e-54 215.3 252 44.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 9.9e-54 214.9 249 43.4
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.3e-53 214.5 289 40.8
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.3e-53 214.5 239 45.2
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.9e-53 213.4 256 43.0
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.9e-53 213.4 256 43.0
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 8.4e-53 211.8 257 42.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 8.4e-53 211.8 258 41.9
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 8.4e-53 211.8 252 41.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-52 211.5 259 41.7
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.1e-52 211.5 283 39.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 2.4e-52 210.3 256 42.6
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.4e-52 210.3 241 42.3
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 3.2e-52 209.9 236 43.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 9.3e-52 208.4 248 46.4
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 9.3e-52 208.4 313 36.7
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 3.5e-51 206.5 296 39.2
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.5e-49 200.3 274 39.8
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 4.3e-49 199.5 250 43.2
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.6e-48 197.6 251 43.0
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 3.8e-45 186.4 247 39.3
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.0e-42 178.3 252 40.5
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 8.7e-42 175.3 252 40.1
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-41 174.9 210 43.3
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 8.1e-40 168.7 268 37.7
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.7e-37 161.0 230 40.9
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.7e-37 161.0 347 30.0
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 7.1e-36 155.6 226 38.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 9.3e-36 155.2 251 36.7
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 9.3e-28 128.6 122 46.7
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.9e-26 123.2 187 37.4
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 9.7e-25 118.6 144 43.8
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-23 114.8 110 44.5
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 4.5e-22 109.8 109 42.2
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 7.7e-22 109.0 94 52.1
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 6.1e-19 99.4 85 54.1
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 1.8e-18 97.8 80 52.5
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-18 97.4 82 48.8
MCO03G329 Micromonas commoda HOM05D060812 ORTHO05D008947 7.7e-14 82.4 288 27.1
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.9e-12 77.8 95 43.2
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 3.2e-12 77.0 70 50.0
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 3.3e-09 67.0 51 51.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.3e-09 67.0 51 51.0
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 2.0e-06 57.8 49 57.1
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 2.0e-06 57.8 49 57.1


User provided reference genes

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