Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0072s0112 Marchantia polymorpha HOM05D016914 ORTHO05D000571 1.5e-74 282.7 135 100.0
Mapoly0040s0002 Marchantia polymorpha HOM05D016914 ORTHO05D000571 3.6e-73 278.1 132 99.2
Mapoly0050s0056 Marchantia polymorpha HOM05D016914 ORTHO05D000571 2.5e-58 228.8 126 87.3
Mapoly0278s0001 Marchantia polymorpha HOM05D016914 ORTHO05D000571 1.3e-51 206.5 118 83.9
Mapoly0278s0002 Marchantia polymorpha HOM05D016914 ORTHO05D000571 2.2e-38 162.5 127 65.4
Mapoly0188s0002 Marchantia polymorpha HOM05D016914 ORTHO05D000571 1.2e-36 156.8 126 61.9
Mapoly0050s0057 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.1e-32 143.7 126 57.9
Mapoly0073s0011 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.5e-18 96.7 128 39.1
Mapoly0050s0055 Marchantia polymorpha HOM05D016914 ORTHO05D253607 4.2e-13 78.6 84 52.4
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 1.9e-10 69.7 111 34.2
Eucgr.K01265 Eucalyptus grandis HOM05D000782 ORTHO05D000571 5.6e-10 68.2 113 31.9
CDE06G2424 Ceratophyllum demersum HOM05D000782 ORTHO05D000571 9.6e-10 67.4 126 31.7
Aa31LG1G23410 Aethionema arabicum HOM05D000782 ORTHO05D000571 1.3e-09 67.0 113 31.0
Carub.0006s0008 Capsella rubella HOM05D000782 ORTHO05D000571 1.3e-09 67.0 124 32.3
Aqoxy4G02164 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 2.8e-09 65.9 113 32.7
Aqoxy4G02163 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 4.8e-09 65.1 111 31.5
AL6G10280 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 4.8e-09 65.1 111 32.4
AT5G01750 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 4.8e-09 65.1 111 32.4
CANSAT35G0618 Cannabis sativa HOM05D000782 ORTHO05D000571 1.1e-08 63.9 132 29.5
COL.COLO4_11220 Corchorus olitorius HOM05D000782 ORTHO05D000571 1.1e-08 63.9 111 28.8
Ca_08083_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000571 1.4e-08 63.5 117 29.9
Cfa017085 Carpinus fangiana HOM05D000782 ORTHO05D000571 1.8e-08 63.2 115 28.7
Mapoly0085s0018 Marchantia polymorpha HOM05D000782 ORTHO05D000571 1.8e-08 63.2 121 33.1
CANSAT35G0383 Cannabis sativa HOM05D000782 ORTHO05D000571 2.4e-08 62.8 117 29.9
Thecc.04G157000 Theobroma cacao HOM05D000782 ORTHO05D000571 2.4e-08 62.8 117 31.6
Lj2A64T52 Lonicera japonica HOM05D000782 ORTHO05D000571 3.1e-08 62.4 113 30.1
Aa31LG1G23400 Aethionema arabicum HOM05D000782 ORTHO05D000571 4.0e-08 62.0 116 31.0
Thhalv10014621m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 4.0e-08 62.0 111 30.6
BcaB01g06251 Brassica carinata HOM05D000782 ORTHO05D000571 5.3e-08 61.6 111 29.7
Psat1g155400 Pisum sativum HOM05D000782 ORTHO05D000571 5.3e-08 61.6 118 28.8
Migut.K00916 Erythranthe guttata HOM05D000782 ORTHO05D000571 6.9e-08 61.2 111 31.5
Peaxi162Scf00009g00813 Petunia axillaris HOM05D000782 ORTHO05D000571 6.9e-08 61.2 136 27.9
Atru.chr8.2449 Acer truncatum HOM05D000782 ORTHO05D000571 9.0e-08 60.8 111 29.7
Peaxi162Scf01691g00011 Petunia axillaris HOM05D000782 ORTHO05D000571 9.0e-08 60.8 133 28.6
Lj1g0027513 Lotus japonicus HOM05D000782 ORTHO05D000571 1.2e-07 60.5 118 27.1
Medtr7g072170 Medicago truncatula HOM05D000782 ORTHO05D000571 1.2e-07 60.5 125 26.4
Peaxi162Scf00009g00812 Petunia axillaris HOM05D000782 ORTHO05D000571 1.2e-07 60.5 125 28.8
SEGI_35763 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 1.2e-07 60.5 107 33.6
VMungo0925G0001 Vigna mungo HOM05D000782 ORTHO05D000571 1.2e-07 60.5 124 27.4
Cfa017081 Carpinus fangiana HOM05D000744 ORTHO05D000332 1.5e-07 60.1 117 29.9
Ca_07723_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 1.5e-07 60.1 122 27.9
Ca_07729_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 1.5e-07 60.1 122 27.9
DCAR_028905 Daucus carota HOM05D000782 ORTHO05D000571 1.5e-07 60.1 117 28.2
Glyma.18G209800 Glycine max HOM05D000782 ORTHO05D000571 1.5e-07 60.1 113 28.3
Potri.016G130500 Populus trichocarpa HOM05D000782 ORTHO05D000571 1.5e-07 60.1 120 30.8
Potri.016G131850 Populus trichocarpa HOM05D000782 ORTHO05D000571 1.5e-07 60.1 111 31.5
Cfa017082 Carpinus fangiana HOM05D000782 ORTHO05D000571 2.0e-07 59.7 117 29.1
Dinv25291 Davidia involucrata HOM05D000782 ORTHO05D000571 2.0e-07 59.7 113 28.3
Medtr7g072120 Medicago truncatula HOM05D000782 ORTHO05D000571 2.0e-07 59.7 128 27.3
Psat3g121480 Pisum sativum HOM05D000782 ORTHO05D000571 2.0e-07 59.7 111 27.0
Medtr7g072140 Medicago truncatula HOM05D000782 ORTHO05D000571 2.6e-07 59.3 123 27.6
Potri.016G131800 Populus trichocarpa HOM05D000782 ORTHO05D000571 2.6e-07 59.3 111 31.5
SEGI_02032 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 2.6e-07 59.3 107 32.7
TAR623G1064 Trochodendron aralioides HOM05D000782 ORTHO05D000571 3.4e-07 58.9 113 27.4
Actinidia29055 Actinidia chinensis HOM05D000782 ORTHO05D000571 5.8e-07 58.2 124 27.4
Aqoxy4G00264 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 5.8e-07 58.2 124 29.8
Cc06_g00620 Coffea canephora HOM05D000782 ORTHO05D000571 5.8e-07 58.2 113 30.1
DCAR_028904 Daucus carota HOM05D000782 ORTHO05D000571 5.8e-07 58.2 115 29.6
Potri.016G130700 Populus trichocarpa HOM05D000782 ORTHO05D000571 5.8e-07 58.2 111 29.7
TAR623G1291 Trochodendron aralioides HOM05D000782 ORTHO05D000571 5.8e-07 58.2 113 26.5
COL.COLO4_03319 Corchorus olitorius HOM05D000782 ORTHO05D000571 7.6e-07 57.8 128 26.6
PSO170G5746 Papaver somniferum HOM05D000782 ORTHO05D000571 7.6e-07 57.8 113 27.4
Aqoxy3G02343 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 1.0e-06 57.4 109 30.3
DCAR_015455 Daucus carota HOM05D000782 ORTHO05D000571 1.0e-06 57.4 125 28.8
HanXRQChr15g0463441 Helianthus annuus HOM05D000002 ORTHO05D000571 1.0e-06 57.4 111 29.7
Potri.016G131701 Populus trichocarpa HOM05D000782 ORTHO05D000571 1.0e-06 57.4 107 30.8
Thecc.04G157300 Theobroma cacao HOM05D000782 ORTHO05D000571 1.3e-06 57.0 111 26.1
Duzib138G0029 Durio zibethinus HOM05D000782 ORTHO05D000571 1.7e-06 56.6 121 28.9
Thhalv10025938m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.7e-06 56.6 118 28.8
Gohir.A08G097700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.7e-06 56.6 111 27.0
RcHm_v2.0_Chr3g0461181 Rosa chinensis HOM05D000782 ORTHO05D000571 1.7e-06 56.6 113 31.9
CiPaw.10G162600 Carya illinoinensis HOM05D000782 ORTHO05D000571 2.2e-06 56.2 115 27.8
Migut.J00079 Erythranthe guttata HOM05D000782 ORTHO05D000571 2.2e-06 56.2 114 29.8
Potri.016G130800 Populus trichocarpa HOM05D000782 ORTHO05D000571 2.2e-06 56.2 103 34.0
Aqoxy4G00262 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 2.9e-06 55.8 124 29.0
ClCG10G022570 Citrullus lanatus HOM05D000782 ORTHO05D000571 2.9e-06 55.8 117 29.1
Manes.09G114200 Manihot esculenta HOM05D000782 ORTHO05D000571 2.9e-06 55.8 129 27.9
Manes.09G114300 Manihot esculenta HOM05D000782 ORTHO05D000571 2.9e-06 55.8 117 29.1
Nitab4.5_0000263g0120 Nicotiana tabacum HOM05D000782 ORTHO05D000571 3.8e-06 55.5 114 28.9
SEGI_20022 Sequoiadendron giganteum HOM05D000551 ORTHO05D003266 3.8e-06 55.5 112 32.1
DCAR_028900 Daucus carota HOM05D000782 ORTHO05D000571 4.9e-06 55.1 113 24.8
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 4.9e-06 55.1 113 27.4
Potri.016G131100 Populus trichocarpa HOM05D000782 ORTHO05D000571 4.9e-06 55.1 117 32.5
Carub.0003s1663 Capsella rubella HOM05D000782 ORTHO05D000571 6.5e-06 54.7 110 29.1
Duzib268G1814 Durio zibethinus HOM05D000782 ORTHO05D000571 6.5e-06 54.7 119 28.6


User provided reference genes

Program Settings