Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.3e-73 278.9 145 100.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.8e-23 112.5 125 47.2
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 6.2e-23 111.3 129 51.2
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 6.2e-23 111.3 71 73.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 6.2e-23 111.3 71 70.4
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 8.2e-23 110.9 132 47.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.8e-22 109.8 101 55.4
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.4e-22 109.4 71 69.0
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 2.4e-22 109.4 71 70.4
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 3.1e-22 109.0 135 48.1
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 3.1e-22 109.0 71 71.8
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 3.1e-22 109.0 71 67.6
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 4.0e-22 108.6 103 54.4
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.0e-22 108.6 125 45.6
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 70.4
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 4.0e-22 108.6 71 71.8
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 5.3e-22 108.2 68 72.1
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 5.3e-22 108.2 83 63.9
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 5.3e-22 108.2 71 70.4
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 5.3e-22 108.2 71 67.6
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 6.9e-22 107.8 125 45.6
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 6.9e-22 107.8 125 45.6
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 6.9e-22 107.8 125 45.6
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 6.9e-22 107.8 132 50.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 6.9e-22 107.8 71 69.0
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 9.0e-22 107.5 100 54.0
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 9.0e-22 107.5 71 73.2
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 9.0e-22 107.5 71 70.4
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 9.0e-22 107.5 71 67.6
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.2e-21 107.1 71 73.2
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.2e-21 107.1 71 73.2
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.2e-21 107.1 71 69.0
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.5e-21 106.7 128 51.6
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.5e-21 106.7 73 68.5
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.5e-21 106.7 71 69.0
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.0e-21 106.3 70 64.3
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.0e-21 106.3 125 48.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.6e-21 105.9 71 67.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.6e-21 105.9 73 64.4
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 2.6e-21 105.9 71 67.6
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 3.4e-21 105.5 71 67.6
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.4e-21 105.5 95 56.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 3.4e-21 105.5 73 67.1
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 4.5e-21 105.1 71 67.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 5.8e-21 104.8 71 67.6
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 5.8e-21 104.8 71 64.8
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 5.8e-21 104.8 71 66.2
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 5.8e-21 104.8 69 69.6
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.8e-21 104.8 75 65.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 5.8e-21 104.8 69 69.6
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 7.6e-21 104.4 71 66.2
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 7.6e-21 104.4 71 66.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 7.6e-21 104.4 71 67.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 7.6e-21 104.4 71 69.0
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.0e-20 104.0 71 66.2
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.0e-20 104.0 71 66.2
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.3e-20 103.6 69 68.1
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.3e-20 103.6 69 68.1
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.3e-20 103.6 69 68.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.3e-20 103.6 69 68.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.7e-20 103.2 73 68.5
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.7e-20 103.2 71 66.2
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.7e-20 103.2 72 68.1
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.2e-20 102.8 71 66.2
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.2e-20 102.8 71 63.4
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 2.9e-20 102.4 72 68.1
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 4.9e-20 101.7 145 44.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 4.9e-20 101.7 77 63.6
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 6.5e-20 101.3 73 64.4
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 8.4e-20 100.9 69 65.2
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.1e-19 100.5 70 62.9
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.1e-19 100.5 72 66.7
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.4e-19 100.1 69 62.3
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.9e-19 99.8 72 66.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.9e-19 99.8 145 46.2
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.5e-19 99.4 140 46.4
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.2e-19 99.0 66 65.2
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 4.2e-19 98.6 88 50.0
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 5.5e-19 98.2 70 62.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 9.3e-19 97.4 69 60.9
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.7e-18 95.9 133 45.1
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 2.3e-17 92.8 70 57.1
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 3.0e-17 92.4 65 61.5
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 5.1e-17 91.7 128 45.3
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 5.1e-17 91.7 58 67.2
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.5e-16 90.1 90 53.3
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 4.3e-16 88.6 82 54.9
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 4.8e-15 85.1 114 41.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 8.2e-15 84.3 52 69.2
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 7.7e-13 77.8 48 66.7
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.0e-12 77.4 49 67.3
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 5.0e-12 75.1 59 61.0
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 2.5e-08 62.8 69 44.9


User provided reference genes

Program Settings