Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0072s0041 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.2e-91 339.0 176 100.0
Mapoly0121s0040 Marchantia polymorpha HOM05D010830 ORTHO05D013093 9.2e-37 157.5 174 48.3
Mapoly0135s0042 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.0e-16 89.0 166 34.9
Mapoly0047s0059 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.2e-15 87.4 141 39.0
Mapoly0053s0049 Marchantia polymorpha HOM05D010830 ORTHO05D013093 4.5e-15 85.5 138 40.6
Mapoly0047s0058 Marchantia polymorpha HOM05D010830 ORTHO05D013093 7.6e-15 84.7 173 37.0
Mapoly0047s0060 Marchantia polymorpha HOM05D010830 ORTHO05D013093 7.6e-15 84.7 173 37.0
Mapoly0135s0046 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.4e-14 81.6 153 35.3
Mapoly0059s0072 Marchantia polymorpha HOM05D010830 ORTHO05D013093 1.9e-13 80.1 173 37.6
Mapoly0135s0043 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.2e-13 79.3 153 35.9
Mapoly0333s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 3.2e-13 79.3 163 36.2
SEGI_17706 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.7e-12 76.3 173 34.1
Mapoly0016s0001 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.0e-12 75.1 152 36.8
Mapoly0016s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.0e-12 75.1 152 36.8
Mapoly0152s0002 Marchantia polymorpha HOM05D010830 ORTHO05D013093 6.0e-12 75.1 152 36.8
Mapoly0152s0003 Marchantia polymorpha HOM05D010830 ORTHO05D013093 7.9e-12 74.7 124 39.5
Mapoly0154s0011 Marchantia polymorpha HOM05D029457 ORTHO05D048774 6.7e-11 71.6 168 30.4
COL.COLO4_29382 Corchorus olitorius HOM05D000180 ORTHO05D000099 8.7e-11 71.2 156 37.2
Mapoly0024s0020 Marchantia polymorpha HOM05D010830 ORTHO05D013093 8.7e-11 71.2 156 35.9
Eucgr.A02485 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.1e-10 70.9 150 35.3
Gohir.A02G098600 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.6e-09 67.0 151 33.8
Gohir.D03G085200 Gossypium hirsutum HOM05D000180 ORTHO05D000099 2.1e-09 66.6 149 33.6
Mapoly0059s0071 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.1e-09 66.6 172 34.3
Mapoly0060s0115 Marchantia polymorpha HOM05D010830 ORTHO05D013093 2.1e-09 66.6 154 35.7
Pp3c13_12170 Physcomitrium patens HOM05D000180 ORTHO05D000099 6.2e-09 65.1 171 32.2
Aqoxy3G03747 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 8.1e-09 64.7 147 36.1
Cpa.g.sc85.37 Carica papaya HOM05D000180 ORTHO05D000099 8.1e-09 64.7 181 33.1
Duzib128G1012 Durio zibethinus HOM05D000180 ORTHO05D000099 1.4e-08 63.9 152 33.6
Duzib106G2046 Durio zibethinus HOM05D000180 ORTHO05D000099 1.8e-08 63.5 175 30.3
arahy.Tifrunner.gnm1.ann1.FTV255 Arachis hypogaea HOM05D000180 ORTHO05D000099 3.1e-08 62.8 140 32.9
Gohir.A09G213000 Gossypium hirsutum HOM05D000180 ORTHO05D000099 3.1e-08 62.8 149 32.9
Gohir.D04G090800 Gossypium hirsutum HOM05D000180 ORTHO05D000099 3.1e-08 62.8 157 33.1
CiPaw.09G027500 Carya illinoinensis HOM05D000180 ORTHO05D000099 4.0e-08 62.4 142 34.5
Lsat_1_v5_gn_6_36240 Lactuca sativa HOM05D000180 ORTHO05D000099 4.0e-08 62.4 140 28.6
Lalb_Chr07g0190981 Lupinus albus HOM05D000180 ORTHO05D000099 4.0e-08 62.4 141 32.6
SalBow6G2572 Salvia bowleyana HOM05D000180 ORTHO05D000099 4.0e-08 62.4 143 32.9
Duzib093G0842 Durio zibethinus HOM05D000180 ORTHO05D000099 5.3e-08 62.0 155 29.7
Duzib106G1520 Durio zibethinus HOM05D000180 ORTHO05D000099 5.3e-08 62.0 169 28.4
Lsat_1_v5_gn_8_126040 Lactuca sativa HOM05D000180 ORTHO05D000099 5.3e-08 62.0 145 33.1
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 5.3e-08 62.0 146 34.9
COL.COLO4_29384 Corchorus olitorius HOM05D000180 ORTHO05D000099 6.9e-08 61.6 151 33.1
Gohir.D09G206600 Gossypium hirsutum HOM05D000180 ORTHO05D000099 6.9e-08 61.6 149 32.2
Gorai.006G230500 Gossypium raimondii HOM05D000180 ORTHO05D000099 6.9e-08 61.6 149 32.2
HanXRQChr02g0043641 Helianthus annuus HOM05D000180 ORTHO05D000099 6.9e-08 61.6 177 31.1
Thecc.05G177400 Theobroma cacao HOM05D000180 ORTHO05D000099 6.9e-08 61.6 141 32.6
COL.COLO4_29376 Corchorus olitorius HOM05D000180 ORTHO05D000099 9.0e-08 61.2 165 29.1
Lalb_Chr18g0048081 Lupinus albus HOM05D000180 ORTHO05D000099 1.2e-07 60.8 144 33.3
Medtr1g054525 Medicago truncatula HOM05D000180 ORTHO05D000099 1.2e-07 60.8 183 29.0
TPR.G7722 Trifolium pratense HOM05D000180 ORTHO05D000099 1.2e-07 60.8 156 32.1
CAN.G631.41 Capsicum annuum HOM05D000180 ORTHO05D000099 1.5e-07 60.5 148 29.7
TWI60G0860 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 1.5e-07 60.5 168 31.5
TWI60G1496 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 1.5e-07 60.5 168 31.5
Thecc.05G176700 Theobroma cacao HOM05D000180 ORTHO05D000099 2.0e-07 60.1 180 31.7
ECA233G0609 Erigeron canadensis HOM05D000180 ORTHO05D000099 2.6e-07 59.7 157 26.8
TWI60G0471 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 2.6e-07 59.7 171 30.4
TWI60G1599 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 2.6e-07 59.7 171 30.4
Peaxi162Scf00363g00822 Petunia axillaris HOM05D000180 ORTHO05D000099 3.4e-07 59.3 149 30.9
SMO304G0105 Selaginella moellendorffii HOM05D000180 ORTHO05D000099 3.4e-07 59.3 121 32.2
TWI79G1603 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 3.4e-07 59.3 142 33.8
Cpa.g.sc85.36 Carica papaya HOM05D000180 ORTHO05D000099 4.5e-07 58.9 159 30.2
Duzib093G0294 Durio zibethinus HOM05D000180 ORTHO05D000099 5.8e-07 58.5 157 31.8
Lalb_Chr18g0048071 Lupinus albus HOM05D000180 ORTHO05D000099 5.8e-07 58.5 142 32.4
Atru.chr8.1173 Acer truncatum HOM05D000180 ORTHO05D000099 7.6e-07 58.2 158 31.6
Actinidia10443 Actinidia chinensis HOM05D000180 ORTHO05D000099 7.6e-07 58.2 153 34.0
arahy.Tifrunner.gnm1.ann1.627UR1 Arachis hypogaea HOM05D000180 ORTHO05D000099 7.6e-07 58.2 141 32.6
Eucgr.A02487 Eucalyptus grandis HOM05D000180 ORTHO05D000099 7.6e-07 58.2 153 30.7
Gorai.003G077400 Gossypium raimondii HOM05D000180 ORTHO05D000099 7.6e-07 58.2 127 33.9
Nitab4.5_0003262g0010 Nicotiana tabacum HOM05D000180 ORTHO05D000099 7.6e-07 58.2 141 30.5
Solyc07g042300.1 Solanum lycopersicum HOM05D000180 ORTHO05D000099 7.6e-07 58.2 180 28.9
arahy.Tifrunner.gnm1.ann1.K5B2IJ Arachis hypogaea HOM05D000180 ORTHO05D000099 9.9e-07 57.8 141 32.6
arahy.Tifrunner.gnm1.ann1.SCSZ0G Arachis hypogaea HOM05D000180 ORTHO05D000099 9.9e-07 57.8 141 32.6
Eucgr.C02472 Eucalyptus grandis HOM05D000180 ORTHO05D000099 9.9e-07 57.8 151 31.8
Eucgr.L00694 Eucalyptus grandis HOM05D000180 ORTHO05D000099 9.9e-07 57.8 151 31.8
Nitab4.5_0000009g0170 Nicotiana tabacum HOM05D000180 ORTHO05D000099 9.9e-07 57.8 141 30.5
Potri.001G214600 Populus trichocarpa HOM05D000180 ORTHO05D000099 9.9e-07 57.8 169 29.6
arahy.Tifrunner.gnm1.ann1.DZA1VM Arachis hypogaea HOM05D000180 ORTHO05D000099 1.3e-06 57.4 141 32.6
arahy.Tifrunner.gnm1.ann1.PR32JD Arachis hypogaea HOM05D000180 ORTHO05D000099 1.3e-06 57.4 141 32.6
Cpa.g.sc85.38 Carica papaya HOM05D000180 ORTHO05D000099 1.3e-06 57.4 164 31.1
CiPaw.15G114000 Carya illinoinensis HOM05D000180 ORTHO05D000099 1.3e-06 57.4 176 31.2
Cc08_g03560 Coffea canephora HOM05D000180 ORTHO05D000099 1.3e-06 57.4 185 29.2
Gohir.A12G184300 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.3e-06 57.4 169 30.2
Gorai.008G200500 Gossypium raimondii HOM05D000180 ORTHO05D000099 1.3e-06 57.4 175 29.7
Lsat_1_v5_gn_1_15201 Lactuca sativa HOM05D000180 ORTHO05D000099 1.3e-06 57.4 175 30.3
Manes.06G081000 Manihot esculenta HOM05D000180 ORTHO05D000099 1.3e-06 57.4 174 33.3
Gorai.012G145800 Gossypium raimondii HOM05D000180 ORTHO05D000099 2.2e-06 56.6 146 32.2
Oeu008840.1 Olea europaea HOM05D001508 ORTHO05D001381 2.2e-06 56.6 161 30.4
CARHR023260 Cardamine hirsuta HOM05D000180 ORTHO05D000099 2.9e-06 56.2 146 31.5
AUR62010779 Chenopodium quinoa HOM05D001508 ORTHO05D001381 2.9e-06 56.2 141 31.9
COL.COLO4_29380 Corchorus olitorius HOM05D000180 ORTHO05D000099 2.9e-06 56.2 155 32.9
Duzib128G0751 Durio zibethinus HOM05D000180 ORTHO05D000099 2.9e-06 56.2 176 28.4
Lalb_Chr01g0013261 Lupinus albus HOM05D000180 ORTHO05D000099 2.9e-06 56.2 142 31.7
Manes.09G038500 Manihot esculenta HOM05D000180 ORTHO05D000099 2.9e-06 56.2 153 30.1
SEGI_02512 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 2.9e-06 56.2 146 28.8
TWI79G0019 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 2.9e-06 56.2 180 27.8
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 3.8e-06 55.8 179 26.3
FvH4_6g42490 Fragaria vesca HOM05D000180 ORTHO05D000099 3.8e-06 55.8 162 29.0
Oeu004535.1 Olea europaea HOM05D000180 ORTHO05D000099 3.8e-06 55.8 153 34.0
Thecc.05G177100 Theobroma cacao HOM05D000180 ORTHO05D000099 3.8e-06 55.8 141 31.2
Lsat_1_v5_gn_6_36221 Lactuca sativa HOM05D000180 ORTHO05D000099 4.9e-06 55.5 140 26.4
RcHm_v2.0_Chr6g0244581 Rosa chinensis HOM05D000180 ORTHO05D000099 4.9e-06 55.5 163 28.8
Thecc.03G108200 Theobroma cacao HOM05D000180 ORTHO05D000099 4.9e-06 55.5 176 29.5
CiPaw.11G126700 Carya illinoinensis HOM05D001508 ORTHO05D001381 6.4e-06 55.1 158 28.5
ClCG06G015440 Citrullus lanatus HOM05D000180 ORTHO05D000099 6.4e-06 55.1 177 31.6
Duzib068G0783 Durio zibethinus HOM05D000180 ORTHO05D000099 6.4e-06 55.1 178 29.8
MD14G1052200 Malus domestica HOM05D000180 ORTHO05D000099 8.4e-06 54.7 146 32.2
Sopen07g021940 Solanum pennellii HOM05D000180 ORTHO05D000099 8.4e-06 54.7 180 27.8
Thecc.05G177000 Theobroma cacao HOM05D000180 ORTHO05D000099 8.4e-06 54.7 139 31.7


User provided reference genes

Program Settings