Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0071s0099 Marchantia polymorpha HOM05D014975 ORTHO05D016505 0.0e+00 3316.9 1719 100.0
Pp3c4_20150 Physcomitrium patens HOM05D014975 ORTHO05D016505 0.0e+00 1334.3 1706 45.4
AagrBONN_evm.TU.Sc2ySwM_362.2826 Anthoceros agrestis HOM05D014975 ORTHO05D016505 0.0e+00 1183.7 1347 49.4
CBR_g58401 Chara braunii HOM05D014975 ORTHO05D016505 4.2e-291 1005.7 1989 34.0
PRCOL_00005012 Prasinoderma coloniale HOM05D014975 ORTHO05D016505 4.6e-250 869.4 1769 34.4
Cre09.g386736 Chlamydomonas reinhardtii HOM05D014975 ORTHO05D016505 1.3e-180 638.6 1783 29.1
MCO16G645 Micromonas commoda HOM05D014975 ORTHO05D016505 4.3e-147 527.3 882 37.2
AagrBONN_evm.TU.Sc2ySwM_362.2828 Anthoceros agrestis HOM05D014975 ORTHO05D016505 3.8e-58 231.9 376 38.6
MCO09G563 Micromonas commoda HOM05D009332 ORTHO05D011893 3.4e-35 155.6 507 24.1
PRCOL_00001248 Prasinoderma coloniale HOM05D009332 ORTHO05D011893 5.3e-28 131.7 504 23.0
MCO12G477 Micromonas commoda HOM05D009332 ORTHO05D011893 1.6e-24 120.2 463 22.5
MCO13G159 Micromonas commoda HOM05D009332 ORTHO05D011893 2.5e-17 96.3 523 21.8
PRCOL_00005569 Prasinoderma coloniale HOM05D012385 ORTHO05D014380 5.5e-17 95.1 497 20.7
PRCOL_00001210 Prasinoderma coloniale HOM05D011955 ORTHO05D016511 8.8e-15 87.8 503 22.9
CBR_g37719 Chara braunii HOM05D011955 ORTHO05D016511 2.2e-13 83.2 151 32.5
SMO122G0005 Selaginella moellendorffii HOM05D014975 ORTHO05D016505 2.2e-13 83.2 100 44.0
Mapoly0137s0026 Marchantia polymorpha HOM05D011955 ORTHO05D016511 2.6e-11 76.3 175 29.1
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 1.4e-09 70.5 385 22.9
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 7.2e-09 68.2 185 27.0
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 9.4e-09 67.8 198 25.3
Sp1g35950 Schrenkiella parvula HOM05D003769 ORTHO05D004521 1.2e-08 67.4 302 24.2
BcaB04g17498 Brassica carinata HOM05D003769 ORTHO05D004521 1.6e-08 67.0 299 23.1
CBR_g23749 Chara braunii HOM05D012385 ORTHO05D014380 1.6e-08 67.0 282 22.0
A06p03980 Brassica napus HOM05D003769 ORTHO05D004521 2.1e-08 66.6 302 24.2
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 3.6e-08 65.9 209 24.9
Nitab4.5_0009193g0010 Nicotiana tabacum HOM05D007125 ORTHO05D008766 7.9e-08 64.7 186 26.3
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 2.3e-07 63.2 209 24.4
Aa31LG10G4900 Aethionema arabicum HOM05D003769 ORTHO05D004521 3.0e-07 62.8 306 23.9
THA.LOC104820400 Tarenaya hassleriana HOM05D003769 ORTHO05D004521 3.9e-07 62.4 297 23.2
CDE04G2373 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 6.7e-07 61.6 163 26.4
BraA06t23606Z Brassica rapa HOM05D003769 ORTHO05D004521 8.8e-07 61.2 308 23.1
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 2.6e-06 59.7 144 27.1
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 7.4e-06 58.2 117 32.5


User provided reference genes

Program Settings