Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.7e-143 511.9 250 100.0
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.4e-75 286.2 208 67.8
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 3.2e-67 259.2 188 64.9
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 7.1e-67 258.1 185 65.4
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.6e-66 256.9 187 64.7
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.6e-66 256.9 187 63.6
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 1.6e-66 256.9 204 60.8
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.7e-66 256.1 195 63.6
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 4.6e-66 255.4 185 64.9
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 4.6e-66 255.4 185 64.9
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 4.6e-66 255.4 226 56.6
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 6.0e-66 255.0 204 61.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 6.0e-66 255.0 187 63.6
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 7.9e-66 254.6 185 64.3
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 7.9e-66 254.6 194 61.9
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.3e-65 253.8 185 64.9
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.3e-65 253.8 187 63.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.3e-65 253.8 185 64.9
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.8e-65 253.4 227 55.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.8e-65 253.4 187 63.6
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.8e-65 253.4 204 60.8
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.3e-65 253.1 219 58.0
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.0e-65 252.7 214 57.0
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.9e-65 252.3 187 63.1
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.9e-65 252.3 188 63.3
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.9e-65 252.3 188 63.3
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.9e-65 252.3 205 60.0
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 3.9e-65 252.3 187 62.0
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 5.1e-65 251.9 185 63.8
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 6.7e-65 251.5 186 64.5
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 6.7e-65 251.5 185 63.8
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 8.7e-65 251.1 186 64.5
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 8.7e-65 251.1 207 59.4
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.7e-65 251.1 187 62.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 1.1e-64 250.8 187 61.5
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.1e-64 250.8 187 62.0
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.1e-64 250.8 207 58.9
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.1e-64 250.8 187 63.1
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.1e-64 250.8 187 63.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.5e-64 250.4 235 53.6
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.9e-64 250.0 194 60.8
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.9e-64 250.0 195 60.0
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.9e-64 250.0 188 63.3
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.5e-64 249.6 187 63.1
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.5e-64 249.6 214 56.5
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 3.3e-64 249.2 188 62.8
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 3.3e-64 249.2 215 58.1
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 3.3e-64 249.2 204 59.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 5.6e-64 248.4 187 62.0
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 5.6e-64 248.4 234 56.0
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 9.6e-64 247.7 194 60.8
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.3e-63 247.3 187 60.4
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.3e-63 247.3 187 61.5
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.6e-63 246.9 188 61.2
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.1e-63 246.5 187 64.2
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-63 246.5 193 61.7
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-63 246.5 200 60.5
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-63 246.5 200 60.5
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 2.1e-63 246.5 188 62.2
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 4.8e-63 245.4 187 61.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.2e-63 245.0 200 60.0
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 8.1e-63 244.6 187 62.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 1.4e-62 243.8 189 63.5
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.8e-62 243.4 187 61.0
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 4.0e-62 242.3 232 53.4
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 5.3e-62 241.9 187 62.0
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.3e-62 241.9 215 55.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 9.0e-62 241.1 189 61.4
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 9.0e-62 241.1 187 63.1
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 9.0e-62 241.1 185 61.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 9.0e-62 241.1 184 62.0
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.5e-61 240.4 182 63.7
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.5e-61 240.4 186 61.3
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 3.4e-61 239.2 189 61.4
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 3.4e-61 239.2 189 61.4
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 3.4e-61 239.2 189 61.4
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 3.4e-61 239.2 179 63.7
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 7.6e-61 238.0 189 60.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 7.6e-61 238.0 206 59.2
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 7.6e-61 238.0 215 56.3
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 7.6e-61 238.0 180 62.8
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.7e-60 236.9 183 61.7
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 2.2e-60 236.5 189 59.8
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 2.9e-60 236.1 180 62.8
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.9e-60 236.1 186 61.8
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 3.8e-60 235.7 187 59.9
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 3.8e-60 235.7 208 58.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.4e-59 233.8 211 55.9
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.4e-59 233.8 207 56.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.2e-59 232.6 178 63.5
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 4.2e-59 232.3 189 60.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 4.2e-59 232.3 191 57.6
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 2.7e-58 229.6 187 59.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 3.0e-57 226.1 179 62.0
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.1e-56 224.2 183 59.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 2.5e-56 223.0 193 54.9
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 5.7e-56 221.9 184 58.2
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 5.7e-56 221.9 184 58.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 9.0e-54 214.5 165 63.0
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 9.0e-54 214.5 202 54.0
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 6.3e-47 191.8 183 52.5
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.5e-44 181.8 115 69.6
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.5e-44 181.4 145 59.3
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 5.7e-40 168.7 102 70.6
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.2e-31 140.2 132 51.5
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.7e-21 106.7 87 62.1
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 2.5e-19 100.1 89 52.8
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 4.0e-17 92.8 192 33.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 5.4e-14 82.4 86 51.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.0e-12 75.9 81 48.1
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 5.5e-11 72.4 171 29.8
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.0e-10 68.6 72 50.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 1.2e-08 64.7 138 34.8
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 4.1e-06 56.2 33 72.7


User provided reference genes

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