Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 1.6e-198 696.0 398 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 6.2e-97 358.6 405 58.0
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 1.4e-88 330.9 399 52.9
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 2.1e-84 317.0 398 48.7
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 2.7e-84 316.6 404 55.0
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 3.5e-84 316.2 408 57.1
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 1.3e-83 314.3 406 50.0
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 1.9e-82 310.5 404 49.3
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 2.5e-82 310.1 399 50.4
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 7.3e-82 308.5 401 47.9
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 2.8e-81 306.6 400 48.8
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 3.6e-81 306.2 403 48.1
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 4.7e-81 305.8 387 47.8
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 4.7e-81 305.8 400 51.5
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 1.8e-80 303.9 408 50.0
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 5.2e-80 302.4 396 52.0
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 8.9e-80 301.6 408 50.0
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.2e-79 301.2 395 46.3
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 2.0e-79 300.4 401 51.6
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 2.0e-79 300.4 399 46.4
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 2.0e-79 300.4 396 52.3
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 5.8e-79 298.9 396 47.7
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 5.8e-79 298.9 412 51.2
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 7.6e-79 298.5 396 47.7
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 9.9e-79 298.1 398 48.5
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 1.3e-78 297.7 403 51.6
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.7e-78 297.4 396 47.7
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 1.7e-78 297.4 398 49.0
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.7e-78 297.4 399 50.1
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 8.4e-78 295.0 396 51.5
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 1.1e-77 294.7 398 48.5
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 1.1e-77 294.7 403 45.2
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 1.4e-77 294.3 396 46.0
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.4e-77 293.5 396 47.2
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 5.4e-77 292.4 398 46.2
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 7.1e-77 292.0 378 52.9
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 1.6e-76 290.8 377 52.3
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 6.0e-76 288.9 400 51.2
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 1.0e-75 288.1 424 47.4
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 3.0e-75 286.6 437 44.6
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 5.1e-75 285.8 398 49.2
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 6.6e-75 285.4 401 48.9
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 1.5e-74 284.3 400 46.8
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 1.5e-74 284.3 406 50.0
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 1.9e-74 283.9 378 48.4
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 2.5e-74 283.5 398 48.2
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 5.6e-74 282.3 399 47.9
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 5.6e-74 282.3 396 51.8
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 5.6e-74 282.3 397 53.1
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 7.3e-74 282.0 399 49.1
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 7.3e-74 282.0 399 46.1
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 2.1e-73 280.4 421 46.6
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 2.8e-73 280.0 409 44.0
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 2.8e-73 280.0 406 46.6
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.8e-73 280.0 399 46.9
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 4.8e-73 279.3 396 53.3
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 4.8e-73 279.3 407 46.9
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 6.2e-73 278.9 402 50.7
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 8.1e-73 278.5 400 47.2
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 1.1e-72 278.1 406 50.2
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.8e-72 277.3 376 49.5
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 3.1e-72 276.6 398 48.7
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 6.9e-72 275.4 401 50.1
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 1.2e-71 274.6 379 47.2
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 1.2e-71 274.6 383 49.1
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 1.5e-71 274.2 421 44.9
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 2.6e-71 273.5 447 43.0
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 3.4e-71 273.1 407 45.5
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 4.4e-71 272.7 383 48.8
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 4.4e-71 272.7 377 46.2
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 5.8e-71 272.3 400 45.0
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 7.6e-71 271.9 382 45.8
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 1.3e-70 271.2 377 47.7
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 1.3e-70 271.2 376 46.5
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 1.7e-70 270.8 403 50.6
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 1.7e-70 270.8 403 50.6
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 2.2e-70 270.4 383 48.6
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 2.2e-70 270.4 402 50.0
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 3.8e-70 269.6 386 45.9
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 4.9e-70 269.2 385 48.3
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 1.1e-69 268.1 396 49.2
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.4e-69 267.7 375 46.1
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 1.4e-69 267.7 435 42.8
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 3.2e-69 266.5 400 46.2
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 3.2e-69 266.5 403 48.9
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 7.1e-69 265.4 448 44.2
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.7e-68 263.5 396 48.7
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 4.6e-68 262.7 451 42.4
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 7.9e-68 261.9 378 51.3
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 1.3e-67 261.2 375 46.9
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 2.3e-67 260.4 375 49.1
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 5.1e-67 259.2 397 48.1
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 6.6e-67 258.8 389 47.3
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 8.7e-67 258.5 383 51.2
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 1.1e-66 258.1 403 48.4
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 1.5e-66 257.7 379 45.1
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 1.5e-66 257.7 445 44.5
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 1.5e-66 257.7 377 47.7
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 3.3e-66 256.5 393 48.3
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 5.6e-66 255.8 375 45.3
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 1.3e-65 254.6 385 46.2
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 3.6e-65 253.1 381 45.4
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 4.8e-65 252.7 383 49.6
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 1.4e-64 251.1 380 48.7
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.4e-64 251.1 390 43.1
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 2.4e-64 250.4 375 48.8
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 2.4e-64 250.4 377 48.5
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 3.1e-64 250.0 383 48.6
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 5.3e-64 249.2 381 42.8
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 6.9e-64 248.8 395 43.5
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 1.5e-63 247.7 374 45.5
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 2.0e-63 247.3 401 47.4
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 4.5e-63 246.1 383 45.4
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.7e-62 244.2 377 50.4
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 2.2e-62 243.8 389 48.1
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 2.4e-61 240.4 387 46.0
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 2.1e-60 237.3 380 44.5
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 6.7e-59 232.3 378 42.1
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 1.1e-58 231.5 385 46.8
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 2.1e-57 227.3 378 46.8
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 3.7e-57 226.5 170 67.1
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 1.2e-55 221.5 515 37.1
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.5e-55 221.1 349 43.6
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 6.5e-54 215.7 211 55.9
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 2.7e-52 210.3 206 55.8
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 5.1e-51 206.1 367 40.6
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.6e-49 201.1 192 55.2
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.2e-47 194.9 170 61.8
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 6.5e-46 189.1 325 43.1
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 2.5e-42 177.2 390 41.0
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 3.7e-41 173.3 98 80.6
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 3.1e-40 170.2 100 77.0
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 3.1e-40 170.2 100 77.0
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 4.5e-39 166.4 340 40.3
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 1.7e-38 164.5 92 80.4
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 5.5e-37 159.5 501 33.3
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.3e-30 138.3 91 74.7
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 3.2e-29 133.7 332 35.5
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.6e-28 131.3 145 55.9
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 5.1e-27 126.3 151 47.7
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.1e-26 125.2 162 49.4
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 1.7e-25 121.3 263 37.6
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 1.4e-24 118.2 298 37.6
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 2.4e-24 117.5 71 71.8
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 4.5e-23 113.2 326 35.9
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 4.5e-23 113.2 326 35.9
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 5.0e-22 109.8 83 61.4
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.1e-21 108.6 64 75.0
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 4.7e-20 103.2 159 42.8
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 3.0e-19 100.5 94 52.1
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 1.1e-13 82.0 178 32.0
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 7.2e-13 79.3 145 41.4
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 2.1e-12 77.8 236 35.6
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.0e-11 75.5 103 44.7
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 1.6e-07 61.6 82 41.5


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