Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 1.3e-268 929.1 470 100.0
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 3.2e-161 572.4 366 76.2
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 9.4e-153 544.3 367 71.4
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-150 536.6 383 69.5
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-150 536.6 383 69.5
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 4.5e-147 525.4 401 66.6
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 5.0e-146 521.9 392 65.6
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 5.5e-145 518.5 360 68.3
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.2e-144 517.3 359 68.0
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.2e-144 517.3 350 69.4
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.6e-144 516.9 390 63.8
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.6e-144 516.9 390 63.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 4.7e-144 515.4 368 67.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.7e-144 515.4 356 67.1
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 4.7e-144 515.4 350 69.1
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 6.1e-144 515.0 356 68.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.0e-143 514.2 357 68.1
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.4e-143 513.8 350 70.0
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.3e-143 513.1 355 68.5
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.3e-143 513.1 360 68.6
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.3e-143 513.1 400 63.0
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.0e-143 512.7 355 67.9
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 3.9e-143 512.3 365 66.6
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.9e-143 512.3 390 63.1
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 6.7e-143 511.5 356 68.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 8.8e-143 511.1 353 68.3
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 8.8e-143 511.1 350 69.7
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 2.0e-142 510.0 375 65.1
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.6e-142 509.6 354 67.8
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 2.6e-142 509.6 343 70.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.6e-142 509.6 356 68.0
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 3.3e-142 509.2 363 68.3
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 3.3e-142 509.2 391 64.2
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 7.4e-142 508.1 385 64.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 7.4e-142 508.1 375 66.7
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 7.4e-142 508.1 379 65.7
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 7.4e-142 508.1 350 69.7
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.7e-141 506.9 353 68.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.7e-141 506.9 353 68.0
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.7e-141 506.9 381 65.6
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.8e-141 506.1 353 67.7
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.7e-141 505.8 357 66.7
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 8.2e-141 504.6 350 69.1
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.8e-140 503.4 378 64.6
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.4e-140 503.1 353 68.8
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 3.1e-140 502.7 353 66.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.3e-140 501.9 349 66.5
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 9.1e-140 501.1 348 68.7
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.2e-139 500.7 360 65.0
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.5e-139 500.4 357 66.1
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.5e-139 499.2 405 60.2
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.5e-139 498.8 357 66.9
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.5e-139 498.8 375 65.1
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 4.5e-139 498.8 388 63.4
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.5e-139 498.8 350 67.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 5.9e-139 498.4 353 66.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 5.9e-139 498.4 361 66.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.0e-138 497.7 356 65.7
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 1.0e-138 497.7 360 67.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.7e-138 496.9 371 64.7
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 6.5e-138 495.0 357 66.4
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.5e-138 495.0 356 66.6
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.5e-137 493.0 365 66.3
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.5e-137 493.0 401 62.3
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 3.2e-137 492.7 418 59.8
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 6.1e-136 488.4 421 59.9
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 9.7e-134 481.1 354 65.5
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.7e-133 480.3 385 60.0
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.2e-130 469.9 355 65.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.5e-129 466.5 321 69.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 3.2e-129 466.1 353 63.2
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.2e-123 447.6 401 58.9
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.2e-123 447.6 383 61.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 3.8e-122 442.6 353 62.9
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.2e-113 412.5 388 56.7
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 3.6e-112 409.5 419 53.0
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.0e-111 406.4 303 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.2e-110 404.4 277 72.6
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 7.3e-97 358.6 258 66.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 6.2e-96 355.5 233 70.0
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 8.0e-96 355.1 233 70.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.5e-89 334.3 234 68.4
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.3e-85 321.2 379 48.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 4.9e-85 319.3 278 58.3
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.7e-75 287.0 213 63.8
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.6e-70 270.4 174 71.8
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 2.5e-57 227.3 192 58.9
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.4e-52 211.5 145 71.0
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.3e-37 161.8 123 63.4
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.9e-36 157.9 120 63.3
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 2.7e-11 74.3 77 53.2


User provided reference genes

Program Settings