Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 0.0e+00 1136.3 805 100.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 4.3e-49 200.7 233 55.4
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.3e-45 189.1 222 53.6
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.8e-39 168.7 132 72.7
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.4e-33 147.5 206 47.1
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 9.7e-33 146.4 171 55.0
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 8.2e-32 143.3 168 53.6
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 8.2e-32 143.3 168 53.6
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 8.2e-32 143.3 163 54.6
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.4e-31 142.5 224 43.3
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.4e-31 142.5 218 46.3
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 3.1e-31 141.4 208 44.7
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.1e-31 141.4 162 51.9
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 7.0e-31 140.2 199 49.2
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.2e-30 139.4 215 43.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-30 139.4 199 49.2
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.6e-30 139.0 199 49.2
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 2.0e-30 138.7 221 45.2
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 3.5e-30 137.9 226 42.0
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 4.5e-30 137.5 144 55.6
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 4.5e-30 137.5 229 42.8
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 5.9e-30 137.1 235 45.1
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 5.9e-30 137.1 230 41.7
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 7.7e-30 136.7 227 44.1
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.3e-29 136.0 143 56.6
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.3e-29 136.0 232 44.8
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.3e-29 136.0 166 50.6
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.7e-29 135.6 160 52.5
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.7e-29 135.6 129 61.2
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.2e-29 135.2 135 57.0
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.2e-29 135.2 135 57.0
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 2.9e-29 134.8 188 50.5
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.9e-29 134.8 235 44.7
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.8e-29 134.4 233 42.1
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 3.8e-29 134.4 209 45.0
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 3.8e-29 134.4 163 52.8
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 6.5e-29 133.7 229 45.9
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 6.5e-29 133.7 237 41.4
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 8.5e-29 133.3 211 46.9
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.5e-28 132.5 208 43.8
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.9e-28 132.1 140 55.7
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.9e-28 132.1 172 48.3
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.5e-28 131.7 222 45.0
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.5e-28 131.7 127 58.3
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 3.2e-28 131.3 192 47.4
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 3.2e-28 131.3 241 42.3
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 3.2e-28 131.3 191 46.6
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 4.2e-28 131.0 143 55.2
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 4.2e-28 131.0 211 46.0
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 4.2e-28 131.0 229 42.4
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 5.5e-28 130.6 229 41.0
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 5.5e-28 130.6 223 42.6
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 5.5e-28 130.6 113 61.1
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 5.5e-28 130.6 236 42.8
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 7.2e-28 130.2 221 43.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 9.4e-28 129.8 220 44.5
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 9.4e-28 129.8 229 45.4
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.2e-27 129.4 210 42.4
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.2e-27 129.4 222 42.8
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.1e-27 128.6 195 43.6
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.7e-27 128.3 226 41.6
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.7e-27 128.3 259 41.7
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.7e-27 128.3 205 46.3
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 3.6e-27 127.9 190 47.4
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 6.1e-27 127.1 126 60.3
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.4e-26 125.9 196 43.4
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.4e-26 125.9 209 43.1
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.8e-26 125.6 189 46.6
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.8e-26 125.6 218 43.6
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 2.3e-26 125.2 199 45.2
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 5.2e-26 124.0 214 43.5
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 6.7e-26 123.6 243 40.7
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 6.7e-26 123.6 189 46.6
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 9.7e-25 119.8 220 43.6
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 9.7e-25 119.8 236 40.3
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.8e-24 118.2 154 46.8
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.8e-24 118.2 212 41.5
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 2.4e-23 115.2 218 41.3
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 7.0e-23 113.6 214 40.7
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 7.0e-23 113.6 115 55.7
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 3.5e-22 111.3 207 41.5
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.3e-21 109.4 238 37.8
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 1.0e-18 99.8 197 39.6
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 6.8e-18 97.1 137 47.4
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 2.0e-17 95.5 92 56.5
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 2.8e-16 91.7 152 44.1
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 2.4e-15 88.6 148 45.9
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.1e-15 88.2 144 43.8
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.1e-15 88.2 156 39.1
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 9.1e-15 86.7 179 36.9
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.2e-14 86.3 223 32.7
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.2e-14 86.3 148 43.9
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.2e-14 86.3 170 42.9
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 3.5e-14 84.7 185 36.2
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 3.5e-14 84.7 198 38.4
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 4.5e-14 84.3 84 56.0
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 4.5e-14 84.3 148 44.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 5.9e-14 84.0 115 44.3
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 5.9e-14 84.0 75 58.7
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 5.9e-14 84.0 174 38.5
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 7.7e-14 83.6 157 40.8
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 7.7e-14 83.6 157 40.8
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 7.7e-14 83.6 195 37.4
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.7e-13 82.4 168 40.5
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 6.6e-13 80.5 180 36.7
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.9e-12 79.0 79 54.4
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.5e-12 78.6 156 37.8
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 3.3e-12 78.2 199 34.2
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 3.3e-12 78.2 171 36.8
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 5.5e-12 77.4 171 35.7
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 7.2e-12 77.0 198 37.9
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.2e-11 76.3 163 37.4
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 3.4e-09 68.2 137 38.7
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.1e-07 61.2 63 52.4


User provided reference genes

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