Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.3e-157 559.7 287 100.0
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 1.9e-47 193.7 228 43.9
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.7e-46 189.9 228 43.9
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 8.0e-46 188.3 229 43.2
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 1.4e-45 187.6 209 45.5
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 2.3e-45 186.8 218 45.4
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.0e-45 186.4 226 42.5
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 3.0e-45 186.4 229 44.5
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 5.2e-45 185.7 229 43.2
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 6.7e-45 185.3 218 43.6
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 6.7e-45 185.3 244 43.4
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.7e-43 180.6 229 42.4
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.7e-43 180.6 225 42.7
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.7e-43 180.6 226 43.8
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.2e-43 180.3 225 42.2
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 2.8e-43 179.9 220 44.1
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.8e-43 179.1 271 40.6
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 4.8e-43 179.1 226 42.5
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 6.3e-43 178.7 232 41.4
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 8.2e-43 178.3 228 42.1
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.4e-42 177.6 227 39.6
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.4e-42 177.6 203 44.8
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.4e-42 177.6 226 45.1
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 2.4e-42 176.8 218 43.1
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 2.4e-42 176.8 227 40.5
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 2.4e-42 176.8 228 40.8
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.4e-42 176.8 229 42.8
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.4e-42 176.8 230 42.6
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 4.1e-42 176.0 210 42.9
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 5.3e-42 175.6 227 38.8
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 5.3e-42 175.6 230 40.9
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 5.3e-42 175.6 223 43.0
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 5.3e-42 175.6 208 43.8
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 7.0e-42 175.3 220 42.3
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 9.1e-42 174.9 223 39.5
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 9.1e-42 174.9 229 41.9
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.2e-41 174.5 228 38.6
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 1.2e-41 174.5 222 39.6
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.2e-41 174.5 221 43.0
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.6e-41 174.1 232 42.7
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.6e-41 174.1 229 41.5
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.6e-41 174.1 228 39.0
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 2.0e-41 173.7 224 40.6
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 2.6e-41 173.3 228 40.8
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 2.6e-41 173.3 228 38.6
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 2.6e-41 173.3 223 41.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 3.5e-41 172.9 245 41.6
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 3.5e-41 172.9 230 43.0
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.5e-41 172.9 229 41.0
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 3.5e-41 172.9 228 40.8
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.5e-41 172.6 229 41.0
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 5.9e-41 172.2 227 39.6
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 5.9e-41 172.2 220 40.0
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.9e-41 172.2 228 38.6
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 5.9e-41 172.2 217 43.3
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 7.7e-41 171.8 226 42.9
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 7.7e-41 171.8 220 42.3
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 7.7e-41 171.8 229 41.0
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 7.7e-41 171.8 228 39.0
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.3e-40 171.0 229 41.0
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.3e-40 171.0 224 43.3
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 1.7e-40 170.6 220 40.5
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 2.2e-40 170.2 233 38.2
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 2.2e-40 170.2 225 40.9
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 3.8e-40 169.5 216 39.8
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 3.8e-40 169.5 224 40.2
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 3.8e-40 169.5 242 38.4
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 3.8e-40 169.5 216 40.3
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 3.8e-40 169.5 225 39.1
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 3.8e-40 169.5 220 42.3
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 5.0e-40 169.1 221 39.4
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 1.1e-39 167.9 213 40.4
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.1e-39 167.9 246 39.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 2.5e-39 166.8 233 37.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 2.5e-39 166.8 227 37.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 2.5e-39 166.8 210 42.4
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 4.2e-39 166.0 221 39.4
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 4.2e-39 166.0 225 40.0
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 5.5e-39 165.6 227 37.4
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 5.5e-39 165.6 226 36.7
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 5.5e-39 165.6 227 37.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 5.5e-39 165.6 227 37.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 9.4e-39 164.9 226 42.5
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 1.2e-38 164.5 219 42.0
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 2.1e-38 163.7 224 39.3
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.7e-38 163.3 211 44.5
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 6.1e-38 162.2 210 41.9
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 6.1e-38 162.2 202 40.6
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 6.1e-38 162.2 221 38.0
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.0e-37 161.4 226 41.6
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.8e-37 160.6 208 43.3
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 4.0e-37 159.5 195 44.1
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 6.8e-37 158.7 206 40.8
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 5.7e-36 155.6 213 40.8
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 9.7e-36 154.8 213 38.5
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 3.1e-34 149.8 221 39.4
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 3.1e-34 149.8 217 37.3
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 4.5e-33 146.0 220 36.8
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 2.2e-32 143.7 220 38.2
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 3.0e-29 133.3 254 32.7
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 6.3e-27 125.6 186 37.6
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.3e-24 117.9 170 34.1
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 4.7e-22 109.4 151 39.7
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 6.8e-21 105.5 147 38.8
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-19 101.3 114 38.6
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 8.3e-19 98.6 109 41.3
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 6.6e-16 89.0 132 38.6
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 6.1e-14 82.4 120 32.5
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 9.8e-12 75.1 185 28.1
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 9.8e-12 75.1 64 54.7
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 6.4e-11 72.4 68 48.5
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.4e-10 71.2 86 47.7


User provided reference genes

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