Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 5.6e-178 627.5 315 100.0
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.4e-99 367.1 249 74.3
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 3.5e-87 325.9 244 68.4
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 2.3e-86 323.2 246 66.7
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 9.5e-85 317.8 240 63.8
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 4.7e-84 315.5 245 64.1
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 6.2e-84 315.1 263 62.0
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 1.4e-83 313.9 245 62.9
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 2.4e-83 313.2 244 64.8
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 2.4e-83 313.2 241 62.7
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 3.1e-83 312.8 245 61.6
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 3.1e-83 312.8 246 61.4
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.6e-82 309.7 248 60.5
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 3.4e-82 309.3 268 57.5
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 4.4e-82 308.9 245 62.0
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 4.4e-82 308.9 246 61.4
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 5.8e-82 308.5 246 62.6
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 7.6e-82 308.1 245 61.6
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 7.6e-82 308.1 243 63.0
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.3e-81 307.4 245 61.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 2.2e-81 306.6 242 61.2
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 2.9e-81 306.2 245 61.6
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.8e-81 305.8 242 61.2
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 3.8e-81 305.8 241 61.0
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.9e-81 305.4 246 60.2
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 6.4e-81 305.1 247 61.1
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 8.4e-81 304.7 245 61.2
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 1.1e-80 304.3 240 61.2
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.1e-80 302.4 211 66.4
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 7.1e-80 301.6 274 58.0
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 7.1e-80 301.6 241 61.4
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.2e-79 300.8 242 61.2
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.2e-79 300.8 241 61.4
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.2e-79 300.8 247 59.1
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 1.6e-79 300.4 248 61.7
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.6e-79 300.4 239 61.9
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 2.7e-79 299.7 247 60.7
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 3.5e-79 299.3 242 61.2
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 3.5e-79 299.3 240 62.1
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 3.5e-79 299.3 246 61.4
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 4.6e-79 298.9 240 60.8
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 4.6e-79 298.9 247 60.7
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 6.0e-79 298.5 246 61.8
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 6.0e-79 298.5 246 60.2
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 7.8e-79 298.1 256 59.8
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 7.8e-79 298.1 244 61.5
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 1.0e-78 297.7 249 59.8
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.0e-78 297.7 241 59.3
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.0e-78 297.7 242 60.7
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.3e-78 297.4 236 62.3
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 1.7e-78 297.0 244 59.8
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 3.0e-78 296.2 246 60.2
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 3.9e-78 295.8 242 59.9
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 3.9e-78 295.8 247 59.5
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 5.1e-78 295.4 256 58.6
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 5.1e-78 295.4 246 59.8
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 5.1e-78 295.4 270 56.3
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 5.1e-78 295.4 222 64.4
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 6.6e-78 295.0 246 58.5
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 8.7e-78 294.7 246 58.1
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.1e-77 294.3 219 64.4
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.5e-77 293.9 219 63.5
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 5.6e-77 292.0 245 58.8
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 5.6e-77 292.0 253 58.5
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 7.3e-77 291.6 216 63.0
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 9.6e-77 291.2 245 58.8
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.2e-76 290.8 216 62.0
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.6e-76 290.4 243 61.3
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 1.6e-76 290.4 244 58.6
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 1.6e-76 290.4 246 58.1
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.6e-76 290.4 246 57.7
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.6e-76 290.4 247 57.5
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 3.6e-76 289.3 245 58.8
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 3.6e-76 289.3 245 58.8
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 6.2e-76 288.5 243 58.4
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 6.2e-76 288.5 210 65.2
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 8.1e-76 288.1 215 64.7
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 8.1e-76 288.1 247 57.1
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 8.1e-76 288.1 219 63.0
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.4e-75 287.3 219 62.6
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.8e-75 287.0 243 57.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.8e-75 287.0 243 57.6
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.4e-75 286.6 232 61.6
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 3.1e-75 286.2 236 58.5
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 4.0e-75 285.8 245 58.4
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 4.0e-75 285.8 253 58.1
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 9.0e-75 284.6 235 61.7
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-74 284.3 243 57.2
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.2e-74 284.3 211 63.5
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.5e-74 283.9 242 58.3
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.6e-74 283.1 233 60.1
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 3.4e-74 282.7 210 63.8
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 4.4e-74 282.3 220 63.2
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 5.8e-74 282.0 239 55.6
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 7.6e-74 281.6 234 59.8
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 7.6e-74 281.6 234 59.8
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.3e-73 280.8 245 55.5
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.7e-73 280.4 231 61.0
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 2.2e-73 280.0 211 64.0
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 6.4e-73 278.5 235 59.1
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 8.4e-73 278.1 235 58.7
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 8.4e-73 278.1 247 54.3
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.9e-72 276.9 243 56.4
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 2.4e-72 276.6 244 57.8
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 2.4e-72 276.6 244 57.8
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 4.2e-72 275.8 240 58.3
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.2e-72 275.8 245 56.7
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 7.1e-72 275.0 235 59.6
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 2.7e-71 273.1 244 57.4
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.7e-71 273.1 244 57.8
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.7e-70 270.4 214 61.2
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 8.7e-70 268.1 262 54.6
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 2.5e-69 266.5 209 62.2
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 1.1e-67 261.2 209 60.8
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.7e-63 246.5 245 53.1
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 1.3e-62 244.2 247 49.4
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.7e-62 241.9 211 56.9
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 5.6e-61 238.8 164 71.3
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 9.0e-59 231.5 188 59.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 5.1e-54 215.7 185 58.9
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.6e-42 175.3 213 45.1
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 2.2e-36 157.1 168 48.8
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 9.1e-35 151.8 144 54.9
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 4.5e-34 149.4 132 56.1
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 3.3e-29 133.3 174 46.6
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 9.4e-24 115.2 107 53.3
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 1.6e-23 114.4 98 60.2
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 3.6e-23 113.2 203 34.0
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 6.3e-12 75.9 48 66.7
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 2.5e-08 63.9 44 59.1
Cfa025913 Carpinus fangiana HOM05D006345 ORTHO05D007428 1.4e-06 58.2 214 27.1


User provided reference genes

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