Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 9.9e-130 466.8 244 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1265 Anthoceros agrestis HOM05D019459 ORTHO05D019626 1.5e-61 240.4 214 56.1
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 9.4e-48 194.5 214 47.7
Pp3c14_26340 Physcomitrium patens HOM05D019459 ORTHO05D019626 3.4e-29 132.9 127 56.7
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 6.0e-18 95.5 221 31.2
Cre08.g375550 Chlamydomonas reinhardtii HOM05D019459 ORTHO05D019626 4.7e-15 85.9 192 31.8
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 1.3e-09 67.8 178 32.6
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 1.3e-09 67.8 182 30.2
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 3.9e-09 66.2 176 29.5
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 5.1e-09 65.9 183 32.2
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 5.1e-09 65.9 188 29.8
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 8.6e-09 65.1 188 29.3
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 1.1e-08 64.7 172 29.1
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.1e-08 64.7 183 31.7
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.1e-08 64.7 178 31.5
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 1.1e-08 64.7 174 29.9
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.9e-08 63.9 176 30.1
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 2.5e-08 63.5 174 29.3
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 2.5e-08 63.5 174 28.2
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 4.3e-08 62.8 174 31.0
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 4.3e-08 62.8 194 31.4
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 5.6e-08 62.4 174 31.0
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 7.3e-08 62.0 176 30.1
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 7.3e-08 62.0 189 29.1
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 1.2e-07 61.2 182 30.8
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.2e-07 61.2 174 30.5
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 1.6e-07 60.8 125 32.0
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.6e-07 60.8 178 30.3
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 1.6e-07 60.8 181 30.9
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 2.1e-07 60.5 182 30.2
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 2.1e-07 60.5 178 29.2
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 2.1e-07 60.5 179 29.6
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.8e-07 60.1 180 30.6
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 2.8e-07 60.1 178 28.7
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.6e-07 59.7 113 34.5
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 3.6e-07 59.7 182 32.4
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 3.6e-07 59.7 113 34.5
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 3.6e-07 59.7 178 29.2
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 3.6e-07 59.7 181 30.4
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 4.7e-07 59.3 178 28.7
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 6.2e-07 58.9 178 29.2
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 8.1e-07 58.5 180 30.6
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 1.4e-06 57.8 178 28.1
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 1.4e-06 57.8 178 28.1
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 1.4e-06 57.8 177 28.8
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 1.4e-06 57.8 178 27.5
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 1.4e-06 57.8 180 28.9
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.8e-06 57.4 113 34.5
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 1.8e-06 57.4 176 27.3
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 1.8e-06 57.4 177 27.7
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 1.8e-06 57.4 177 27.7
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 1.8e-06 57.4 152 30.9
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 1.8e-06 57.4 175 30.3
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.8e-06 57.4 180 29.4
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 1.8e-06 57.4 182 28.6
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 2.4e-06 57.0 148 28.4
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 2.4e-06 57.0 177 27.7
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 2.4e-06 57.0 177 27.7
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 2.4e-06 57.0 177 27.7
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 2.4e-06 57.0 177 27.7
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 2.4e-06 57.0 139 32.4
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 3.1e-06 56.6 179 29.6
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 4.0e-06 56.2 184 28.8
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 5.2e-06 55.8 177 27.7
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 5.2e-06 55.8 177 27.7
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 5.2e-06 55.8 181 30.4
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 5.2e-06 55.8 177 28.2
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 5.2e-06 55.8 110 35.5
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 5.2e-06 55.8 229 24.5
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 6.8e-06 55.5 130 31.5
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 6.8e-06 55.5 177 27.1
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 6.8e-06 55.5 128 33.6
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 6.8e-06 55.5 271 24.0


User provided reference genes

Program Settings