Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 0.0e+00 1647.5 948 100.0
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 9.0e-54 216.5 416 39.2
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.2e-53 216.1 413 39.5
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.4e-53 214.5 497 37.0
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 1.7e-52 212.2 413 42.6
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 2.2e-52 211.8 419 39.1
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 2.9e-52 211.5 542 36.9
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 4.2e-51 207.6 425 39.1
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 7.1e-51 206.8 575 34.6
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 6.0e-50 203.8 534 39.9
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 6.0e-50 203.8 539 34.3
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 6.0e-50 203.8 523 36.3
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 7.9e-50 203.4 532 33.8
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 7.9e-50 203.4 533 33.8
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 7.9e-50 203.4 523 35.9
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 2.3e-49 201.8 542 33.8
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.3e-49 201.8 439 37.8
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.3e-49 201.8 413 39.2
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 8.7e-49 199.9 448 38.2
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 5.7e-48 197.2 551 38.3
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 1.3e-47 196.1 547 34.7
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.3e-47 196.1 523 35.2
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 8.2e-47 193.4 545 32.3
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 8.2e-47 193.4 632 32.9
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 8.2e-47 193.4 517 35.6
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 8.2e-47 193.4 573 37.2
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.4e-46 192.6 570 38.4
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 1.8e-46 192.2 413 38.0
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.8e-46 192.2 435 36.3
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.1e-46 191.4 413 36.8
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 4.1e-46 191.0 517 35.4
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 5.3e-46 190.7 546 33.7
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 1.2e-45 189.5 575 33.0
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 2.6e-45 188.3 424 47.9
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.9e-45 187.2 413 41.2
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 7.6e-45 186.8 532 32.5
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 1.0e-44 186.4 579 32.6
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 5.0e-44 184.1 564 34.8
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 1.9e-43 182.2 414 36.7
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 2.5e-43 181.8 563 33.7
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 3.2e-43 181.4 563 32.0
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 4.2e-43 181.0 421 34.9
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 4.2e-43 181.0 514 34.0
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.5e-43 180.6 572 37.4
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 9.3e-43 179.9 534 33.5
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 2.7e-42 178.3 544 32.2
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 1.0e-41 176.4 524 34.5
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.3e-41 176.0 536 33.4
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.3e-41 175.3 572 33.7
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 3.0e-41 174.9 567 32.1
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 3.9e-41 174.5 541 38.8
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 6.7e-41 173.7 534 33.7
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 1.5e-40 172.6 413 36.1
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 1.5e-40 172.6 332 40.7
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 1.9e-40 172.2 649 30.4
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 3.3e-40 171.4 527 32.4
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 4.3e-40 171.0 565 33.8
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.3e-39 169.5 530 32.6
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.6e-39 169.1 619 31.5
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 6.3e-39 167.2 645 30.7
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.4e-38 166.0 528 33.0
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 9.1e-38 163.3 415 34.2
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.2e-37 162.9 315 40.3
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 2.0e-37 162.2 508 34.4
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.7e-36 159.1 565 30.8
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 3.8e-36 157.9 425 33.4
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 1.1e-35 156.4 424 33.7
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 1.4e-35 156.0 390 34.4
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 2.5e-35 155.2 592 30.9
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 3.2e-35 154.8 535 36.8
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 7.2e-35 153.7 429 33.3
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 3.6e-34 151.4 535 36.4
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 4.6e-34 151.0 425 33.6
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 6.1e-34 150.6 568 30.5
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.1e-33 147.5 572 34.6
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 8.8e-33 146.7 572 33.7
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 8.8e-33 146.7 695 28.8
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 1.1e-32 146.4 539 29.7
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.5e-32 146.0 418 33.5
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 1.5e-32 146.0 551 32.8
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 3.3e-32 144.8 414 33.1
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 1.3e-31 142.9 591 31.1
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 3.7e-31 141.4 423 31.4
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 3.7e-31 141.4 636 30.2
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 8.2e-31 140.2 413 32.4
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 8.2e-31 140.2 539 29.7
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 1.1e-30 139.8 415 33.0
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.4e-30 139.4 407 44.7
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 4.1e-30 137.9 636 29.2
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 6.9e-30 137.1 528 38.8
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 1.5e-29 136.0 545 35.4
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 2.6e-29 135.2 535 29.2
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 7.7e-29 133.7 546 29.5
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 2.9e-28 131.7 602 33.9
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 5.0e-28 131.0 414 32.1
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 5.0e-28 131.0 412 31.8
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.1e-27 129.8 414 31.9
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.1e-27 129.8 414 31.9
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 1.9e-27 129.0 572 33.7
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 5.5e-27 127.5 414 30.9
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 9.4e-27 126.7 654 29.1
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 9.4e-27 126.7 524 31.1
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 9.4e-27 126.7 421 31.6
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 2.1e-26 125.6 414 30.7
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 2.1e-26 125.6 754 26.7
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 6.1e-26 124.0 563 29.3
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 6.1e-26 124.0 415 30.6
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 7.9e-26 123.6 516 29.8
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 7.9e-26 123.6 547 28.2
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 3.0e-25 121.7 658 28.0
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 3.9e-25 121.3 517 30.0
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 3.9e-25 121.3 421 31.1
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 3.9e-25 121.3 618 28.2
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 8.8e-25 120.2 535 28.0
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 1.5e-24 119.4 539 29.3
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.5e-24 119.4 413 30.8
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.5e-24 119.4 545 29.0
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.6e-24 118.6 572 30.9
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 4.4e-24 117.9 478 30.5
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 1.3e-23 116.3 513 29.8
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 2.8e-23 115.2 415 28.7
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 2.8e-23 115.2 117 54.7
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 3.7e-23 114.8 428 30.6
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 9.1e-22 110.2 422 28.9
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.0e-21 109.0 395 35.4
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 2.6e-21 108.6 560 27.7
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 3.5e-21 108.2 526 28.3
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 4.5e-21 107.8 423 28.1
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 5.9e-21 107.5 556 32.7
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 5.9e-21 107.5 402 29.9
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 1.0e-20 106.7 718 26.9
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.7e-20 105.9 1112 26.1
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 2.2e-20 105.5 416 29.1
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 2.2e-20 105.5 579 27.8
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 1.5e-19 102.8 107 52.3
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 3.2e-19 101.7 569 27.1
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 4.7e-18 97.8 518 28.6
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 4.7e-18 97.8 575 26.6
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 4.7e-18 97.8 340 30.9
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 4.0e-17 94.7 551 32.1
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.4e-14 86.3 148 41.2
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 5.3e-14 84.3 537 26.3
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 7.0e-14 84.0 353 28.6
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 7.7e-13 80.5 244 31.6
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 2.9e-12 78.6 75 57.3
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 5.0e-12 77.8 86 52.3
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.1e-11 76.6 413 26.4
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 3.2e-11 75.1 76 59.2
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 9.4e-11 73.6 150 39.3
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 4.7e-10 71.2 201 32.8


User provided reference genes

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