Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 4.0e-243 844.7 567 100.0
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.0e-40 171.4 237 42.6
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.9e-39 167.5 168 51.2
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 4.1e-38 163.7 159 50.9
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 5.4e-38 163.3 170 47.6
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 2.1e-37 161.4 160 50.6
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 3.5e-37 160.6 159 50.3
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 7.8e-37 159.5 162 45.1
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 7.8e-37 159.5 160 51.2
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 7.8e-37 159.5 220 41.4
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 1.3e-36 158.7 243 39.9
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.3e-36 157.9 160 50.6
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 3.0e-36 157.5 140 51.4
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.0e-36 157.5 140 51.4
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.0e-36 157.5 140 51.4
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.0e-36 157.5 140 51.4
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 3.0e-36 157.5 193 43.5
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 3.9e-36 157.1 181 45.3
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 5.1e-36 156.8 133 51.9
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 6.6e-36 156.4 216 42.1
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 8.6e-36 156.0 163 47.9
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.1e-35 155.6 232 37.5
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 1.1e-35 155.6 193 42.5
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 1.1e-35 155.6 217 41.5
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 1.9e-35 154.8 160 48.8
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 1.9e-35 154.8 181 44.2
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 1.9e-35 154.8 241 39.0
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 2.5e-35 154.5 159 49.7
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 3.3e-35 154.1 168 45.8
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 3.3e-35 154.1 167 45.5
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 3.3e-35 154.1 213 40.8
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.3e-35 153.7 133 51.1
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 4.3e-35 153.7 160 48.1
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 4.3e-35 153.7 161 46.0
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 5.6e-35 153.3 240 36.2
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 5.6e-35 153.3 177 42.9
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 5.6e-35 153.3 191 40.3
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 7.3e-35 152.9 205 39.5
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 1.2e-34 152.1 163 46.6
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 1.2e-34 152.1 199 40.7
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 1.2e-34 152.1 210 39.0
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 1.2e-34 152.1 130 52.3
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 1.2e-34 152.1 249 36.9
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 1.6e-34 151.8 171 43.9
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 1.6e-34 151.8 152 46.1
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 1.6e-34 151.8 178 42.1
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 2.1e-34 151.4 152 47.4
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 2.1e-34 151.4 235 37.9
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 2.1e-34 151.4 164 45.1
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 2.1e-34 151.4 189 41.8
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 2.1e-34 151.4 180 43.3
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 2.8e-34 151.0 185 41.6
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 2.8e-34 151.0 161 46.6
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 2.8e-34 151.0 159 47.2
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 2.8e-34 151.0 159 48.4
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 3.6e-34 150.6 156 44.9
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 3.6e-34 150.6 241 36.5
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 3.6e-34 150.6 150 46.7
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 3.6e-34 150.6 172 43.6
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 3.6e-34 150.6 232 37.9
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 3.6e-34 150.6 239 36.4
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 3.6e-34 150.6 215 38.1
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 4.7e-34 150.2 252 35.3
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 4.7e-34 150.2 152 45.4
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 4.7e-34 150.2 179 42.5
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 4.7e-34 150.2 161 44.7
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 4.7e-34 150.2 247 37.7
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 6.2e-34 149.8 150 48.0
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 6.2e-34 149.8 160 47.5
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 6.2e-34 149.8 131 51.9
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 8.1e-34 149.4 150 48.0
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 8.1e-34 149.4 133 50.4
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 8.1e-34 149.4 164 44.5
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 1.1e-33 149.1 164 44.5
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 1.1e-33 149.1 238 36.6
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 1.1e-33 149.1 169 45.0
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 1.1e-33 149.1 161 45.3
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 1.4e-33 148.7 164 44.5
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 1.4e-33 148.7 158 45.6
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 1.4e-33 148.7 133 51.1
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 1.4e-33 148.7 133 51.1
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 1.4e-33 148.7 234 36.8
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 1.4e-33 148.7 211 39.8
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 1.4e-33 148.7 229 37.1
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 1.8e-33 148.3 133 50.4
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 1.8e-33 148.3 257 36.6
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 2.4e-33 147.9 164 43.9
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 2.4e-33 147.9 163 46.0
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.4e-33 147.9 160 45.0
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 3.1e-33 147.5 222 36.9
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 4.0e-33 147.1 246 36.6
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 4.0e-33 147.1 153 45.8
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 4.0e-33 147.1 159 46.5
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 5.2e-33 146.7 173 44.5
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 5.2e-33 146.7 175 43.4
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 5.2e-33 146.7 227 39.2
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 6.8e-33 146.4 169 43.8
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 8.9e-33 146.0 225 37.3
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 8.9e-33 146.0 225 36.4
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 1.2e-32 145.6 273 35.9
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.2e-32 145.6 228 34.6
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.5e-32 145.2 253 37.2
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 2.0e-32 144.8 204 39.2
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 2.0e-32 144.8 175 41.7
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 7.6e-32 142.9 253 36.0
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.3e-31 142.1 254 37.0
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 4.9e-31 140.2 161 43.5
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 8.4e-31 139.4 144 45.1
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 1.1e-30 139.0 173 41.0
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 2.4e-30 137.9 173 39.9
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 3.2e-30 137.5 247 37.2
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 4.2e-30 137.1 254 34.6
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 5.4e-30 136.7 257 34.2
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 2.7e-29 134.4 225 35.1
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 1.3e-28 132.1 276 32.6
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 3.3e-27 127.5 182 40.1
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 9.6e-27 125.9 247 34.0
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 6.9e-25 119.8 101 51.5
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 7.6e-24 116.3 109 48.6
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 6.4e-23 113.2 168 37.5
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 1.2e-21 109.0 160 40.0
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 1.3e-18 99.0 166 33.7
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 4.8e-18 97.1 70 54.3
Atru.chr8.2134 Acer truncatum HOM05D005357 ORTHO05D006354 1.8e-17 95.1 86 52.3
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 4.9e-15 87.0 304 25.7
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 8.4e-15 86.3 116 37.9
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 1.5e-08 65.5 78 42.3
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 1.3e-07 62.4 76 39.5
PGSC0003DMG401020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.9e-06 58.5 68 45.6


User provided reference genes

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