Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0029 Marchantia polymorpha HOM05D021458 ORTHO05D023500 5.2e-257 891.0 604 100.0
Pp3c14_5270 Physcomitrium patens HOM05D021458 ORTHO05D023500 4.8e-186 655.2 567 78.3
AagrBONN_evm.TU.Sc2ySwM_344.667 Anthoceros agrestis HOM05D021458 ORTHO05D023500 1.1e-166 590.9 565 69.2
Pp3c10_5380 Physcomitrium patens HOM05D021458 ORTHO05D023500 1.5e-158 563.9 510 79.4
CBR_g51034 Chara braunii HOM05D021458 ORTHO05D023500 1.7e-58 231.5 225 58.7
Sopen07g023410 Solanum pennellii HOM05D001610 ORTHO05D001585 7.3e-09 66.6 279 24.7
Nitab4.5_0008321g0020 Nicotiana tabacum HOM05D001610 ORTHO05D001585 1.3e-08 65.9 331 23.9
Nitab4.5_0004406g0050 Nicotiana tabacum HOM05D001610 ORTHO05D001585 2.1e-08 65.1 277 23.8
Peaxi162Scf00047g02230 Petunia axillaris HOM05D001610 ORTHO05D001585 2.1e-08 65.1 278 24.1
Potri.018G023800 Populus trichocarpa HOM05D000467 ORTHO05D000379 2.8e-08 64.7 250 26.0
Solyc07g044850.3 Solanum lycopersicum HOM05D001610 ORTHO05D001585 2.8e-08 64.7 279 24.7
Lj2A1141T59 Lonicera japonica HOM05D001610 ORTHO05D001585 3.6e-08 64.3 306 26.1
Haze_21483 Corylus avellana HOM05D000467 ORTHO05D000379 6.2e-08 63.5 214 23.8
Nitab4.5_0006378g0030 Nicotiana tabacum HOM05D001610 ORTHO05D001585 1.4e-07 62.4 279 24.7
Sabra06G0201700 Salix brachista HOM05D000467 ORTHO05D000379 1.4e-07 62.4 214 24.3
Cfa013118 Carpinus fangiana HOM05D000467 ORTHO05D000379 1.8e-07 62.0 214 23.8
CiPaw.07G225800 Carya illinoinensis HOM05D000467 ORTHO05D000379 2.4e-07 61.6 215 24.7
Potri.006G257900 Populus trichocarpa HOM05D000467 ORTHO05D000379 4.0e-07 60.8 214 24.3
Sabra18G0026500 Salix brachista HOM05D000467 ORTHO05D000379 4.0e-07 60.8 219 25.6
ClCG11G016590 Citrullus lanatus HOM05D001610 ORTHO05D001585 5.3e-07 60.5 322 21.7
Duzib168G1503 Durio zibethinus HOM05D000467 ORTHO05D000379 5.3e-07 60.5 214 23.8
MD11G1043800 Malus domestica HOM05D000467 ORTHO05D000379 5.3e-07 60.5 213 22.5
Nitab4.5_0006644g0020 Nicotiana tabacum HOM05D001610 ORTHO05D001585 6.9e-07 60.1 331 23.3
Haze_24746 Corylus avellana HOM05D001610 ORTHO05D001585 1.2e-06 59.3 305 24.6
PGSC0003DMG400007716 Solanum tuberosum HOM05D001610 ORTHO05D001585 1.2e-06 59.3 262 26.0
Potri.014G194100 Populus trichocarpa HOM05D001610 ORTHO05D001585 2.0e-06 58.5 263 26.2
THA.LOC104801118 Tarenaya hassleriana HOM05D001610 ORTHO05D001585 2.0e-06 58.5 270 24.4
Sopen09g025480 Solanum pennellii HOM05D001610 ORTHO05D001585 2.6e-06 58.2 306 25.5
Peaxi162Scf00359g01221 Petunia axillaris HOM05D001610 ORTHO05D001585 3.4e-06 57.8 271 22.5
Prupe.8G212300 Prunus persica HOM05D001610 ORTHO05D001585 3.4e-06 57.8 262 26.3
Sopen05g019720 Solanum pennellii HOM05D001610 ORTHO05D001585 3.4e-06 57.8 269 22.7
Actinidia15760 Actinidia chinensis HOM05D000467 ORTHO05D000379 4.5e-06 57.4 198 24.2
Solyc05g025510.3 Solanum lycopersicum HOM05D001610 ORTHO05D001585 4.5e-06 57.4 269 22.7
CANSAT25G0970 Cannabis sativa HOM05D000467 ORTHO05D000379 5.8e-06 57.0 214 22.9
AUR62008828 Chenopodium quinoa HOM05D001610 ORTHO05D001585 5.8e-06 57.0 281 24.9
Lsat_1_v5_gn_3_36081 Lactuca sativa HOM05D001610 ORTHO05D001585 5.8e-06 57.0 315 22.2
PSO170G6159 Papaver somniferum HOM05D001610 ORTHO05D001585 5.8e-06 57.0 266 24.8
CsaV3_4G032080 Cucumis sativus L. HOM05D001610 ORTHO05D001585 7.6e-06 56.6 324 21.6
ECA246G2154 Erigeron canadensis HOM05D001610 ORTHO05D001585 7.6e-06 56.6 256 23.0
QL02p020983 Quercus lobata HOM05D000467 ORTHO05D000379 7.6e-06 56.6 214 22.0
Oeu056934.2 Olea europaea HOM05D000467 ORTHO05D000379 9.9e-06 56.2 259 20.8


User provided reference genes

Program Settings