Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 1.3e-137 493.0 250 100.0
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 1.6e-55 220.3 242 53.3
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 3.8e-52 209.1 222 52.3
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 2.7e-50 203.0 233 48.9
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.0e-49 199.5 195 54.4
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.0e-49 199.5 195 54.4
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 6.7e-49 198.4 218 48.6
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 4.5e-45 185.7 204 50.0
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 2.2e-44 183.3 183 50.8
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.1e-43 181.0 253 42.7
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.4e-43 180.6 184 50.5
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 5.5e-43 178.7 187 51.9
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.2e-42 177.6 217 46.5
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 1.6e-42 177.2 199 47.7
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 1.6e-42 177.2 199 50.8
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.7e-42 176.4 188 50.0
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 2.7e-42 176.4 190 50.5
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 4.6e-42 175.6 215 47.4
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 6.1e-42 175.3 191 50.3
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 1.0e-41 174.5 188 48.4
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.4e-41 174.1 219 45.2
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 1.8e-41 173.7 192 50.0
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.8e-41 173.7 189 49.7
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 1.8e-41 173.7 189 49.7
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 1.8e-41 173.7 199 47.2
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 1.8e-41 173.7 190 50.0
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 3.0e-41 172.9 215 46.5
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 3.9e-41 172.6 222 43.2
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 5.1e-41 172.2 222 43.7
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 5.1e-41 172.2 205 47.8
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 6.7e-41 171.8 192 49.0
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 8.8e-41 171.4 229 42.8
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 8.8e-41 171.4 200 48.0
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 8.8e-41 171.4 185 49.2
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 1.1e-40 171.0 186 47.8
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 1.1e-40 171.0 186 47.8
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.1e-40 171.0 195 49.7
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.5e-40 170.6 184 47.8
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.0e-40 170.2 173 50.3
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 2.0e-40 170.2 190 47.9
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 2.0e-40 170.2 189 50.3
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 3.3e-40 169.5 189 47.1
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 3.3e-40 169.5 183 49.2
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 4.4e-40 169.1 223 44.8
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 4.4e-40 169.1 194 46.4
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 4.4e-40 169.1 185 48.6
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 5.7e-40 168.7 201 45.8
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.7e-40 168.7 188 48.9
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 7.4e-40 168.3 205 45.4
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 7.4e-40 168.3 183 49.7
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 9.7e-40 167.9 215 44.7
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 9.7e-40 167.9 198 46.0
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 9.7e-40 167.9 182 48.9
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.3e-39 167.5 187 48.7
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 2.2e-39 166.8 189 47.6
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 3.7e-39 166.0 193 49.2
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 3.7e-39 166.0 201 47.8
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 3.7e-39 166.0 183 50.8
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 6.3e-39 165.2 218 43.1
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 6.3e-39 165.2 185 48.1
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.1e-38 164.5 203 45.3
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.8e-38 163.7 183 47.0
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 1.8e-38 163.7 183 47.0
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 1.8e-38 163.7 214 41.6
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 3.1e-38 162.9 197 44.7
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 3.1e-38 162.9 203 44.3
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 4.1e-38 162.5 210 44.3
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 6.9e-38 161.8 205 42.9
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 9.1e-38 161.4 206 46.6
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 9.1e-38 161.4 233 40.3
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-37 161.0 204 45.1
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 1.2e-37 161.0 203 45.8
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.5e-37 160.6 209 42.1
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 2.6e-37 159.8 209 42.1
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 2.6e-37 159.8 190 44.7
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 5.9e-37 158.7 190 44.7
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 7.7e-37 158.3 203 43.8
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.3e-36 157.5 209 41.6
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.3e-36 157.5 129 56.6
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 1.7e-36 157.1 226 40.7
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 2.9e-36 156.4 208 41.8
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 3.8e-36 156.0 197 43.1
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 6.5e-36 155.2 188 47.3
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.1e-35 154.5 197 43.1
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.4e-35 154.1 195 42.6
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 2.5e-35 153.3 206 45.1
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.5e-35 152.1 204 40.7
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 7.2e-35 151.8 179 46.9
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 7.2e-35 151.8 204 40.7
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.4e-35 151.4 204 40.2
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 3.6e-34 149.4 202 43.1
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 6.1e-34 148.7 225 40.0
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 1.8e-33 147.1 182 45.1
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 6.7e-33 145.2 185 45.9
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 9.1e-30 134.8 182 42.3
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.2e-28 130.2 186 41.9
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 6.5e-28 128.6 188 41.0
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.5e-28 128.6 174 40.2
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 1.7e-20 104.0 191 37.2
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 6.8e-09 65.5 106 40.6
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 6.8e-09 65.5 192 29.7
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 6.8e-09 65.5 192 29.7
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-08 64.7 102 40.2
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 1.2e-08 64.7 102 40.2
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 2.6e-08 63.5 105 36.2
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.7e-07 60.8 91 40.7
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 2.2e-07 60.5 60 48.3
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 6.3e-07 58.9 93 40.9
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 8.3e-07 58.5 107 36.4
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 8.3e-07 58.5 90 37.8
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 1.1e-06 58.2 98 36.7
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.1e-06 58.2 121 37.2
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 1.1e-06 58.2 89 37.1
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.4e-06 57.8 94 39.4
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 5.4e-06 55.8 91 39.6


User provided reference genes

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