Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0067s0036 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.8e-218 761.1 371 100.0
Mapoly0041s0095 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.2e-55 219.9 319 38.6
Mapoly0053s0005 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.1e-50 204.9 315 38.7
Mapoly0067s0037 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.3e-43 181.4 316 37.0
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.0e-41 174.1 297 34.0
Mapoly0080s0029 Marchantia polymorpha HOM05D011080 ORTHO05D000239 9.6e-36 155.2 303 32.7
Mapoly0120s0038 Marchantia polymorpha HOM05D011080 ORTHO05D256860 1.0e-32 145.2 335 33.4
Mapoly0067s0038 Marchantia polymorpha HOM05D000005 ORTHO05D000239 5.0e-32 142.9 313 33.9
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.5e-31 140.6 311 32.5
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.5e-31 140.6 280 30.7
Mapoly1060s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.2e-31 140.2 323 32.5
Mapoly0893s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.1e-30 137.5 322 32.0
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.1e-30 136.0 308 33.8
Mapoly0062s0120 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.3e-29 134.8 322 30.7
Mapoly0010s0128 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.3e-29 134.0 269 29.7
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.7e-29 132.5 325 31.1
Mapoly0074s0030 Marchantia polymorpha HOM05D011080 ORTHO05D254173 6.7e-29 132.5 312 31.7
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.1e-28 131.7 264 30.7
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.5e-28 130.6 308 31.2
Mapoly0032s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 9.7e-28 128.6 321 32.7
Mapoly0071s0031 Marchantia polymorpha HOM05D011080 ORTHO05D000239 6.3e-27 125.9 321 29.3
Mapoly0119s0056 Marchantia polymorpha HOM05D011080 ORTHO05D000239 6.3e-27 125.9 338 28.4
Mapoly0147s0004 Marchantia polymorpha HOM05D000242 ORTHO05D000700 1.1e-26 125.2 323 31.0
Mapoly0397s0001 Marchantia polymorpha HOM05D020945 ORTHO05D253181 2.4e-26 124.0 314 29.9
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.4e-26 124.0 286 31.5
Mapoly0108s0045 Marchantia polymorpha HOM05D020945 ORTHO05D000713 2.6e-25 120.6 300 32.0
Mapoly0020s0126 Marchantia polymorpha HOM05D000242 ORTHO05D000700 2.2e-24 117.5 289 29.1
Mapoly0108s0037 Marchantia polymorpha HOM05D029023 ORTHO05D030122 6.5e-24 115.9 311 29.6
Mapoly0110s0039 Marchantia polymorpha HOM05D011080 ORTHO05D000239 6.5e-24 115.9 319 29.2
Mapoly0147s0002 Marchantia polymorpha HOM05D020945 ORTHO05D251377 6.5e-24 115.9 302 30.1
Mapoly0147s0041 Marchantia polymorpha HOM05D000242 ORTHO05D000700 6.5e-24 115.9 313 27.8
Mapoly0555s0001 Marchantia polymorpha HOM05D029023 ORTHO05D030122 6.5e-24 115.9 311 29.6
Mapoly0052s0114 Marchantia polymorpha HOM05D029023 ORTHO05D030122 8.5e-24 115.5 311 29.6
Mapoly0147s0044 Marchantia polymorpha HOM05D000242 ORTHO05D000700 3.2e-23 113.6 315 27.6
Mapoly0016s0164 Marchantia polymorpha HOM05D004348 ORTHO05D000239 9.4e-23 112.1 243 30.5
Mapoly0120s0044 Marchantia polymorpha HOM05D011080 ORTHO05D253140 1.6e-22 111.3 213 33.8
Mapoly0116s0050 Marchantia polymorpha HOM05D011080 ORTHO05D252286 3.6e-22 110.2 296 27.4
Mapoly2448s0001 Marchantia polymorpha HOM05D020945 ORTHO05D251686 4.6e-22 109.8 238 33.2
Pp3c24_4860 Physcomitrium patens HOM05D004348 ORTHO05D000239 4.6e-22 109.8 156 35.9
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.0e-21 108.6 288 27.8
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 4.4e-20 103.2 315 27.9
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 4.4e-20 103.2 293 27.6
Mapoly0346s0002 Marchantia polymorpha HOM05D020945 ORTHO05D254421 4.4e-20 103.2 305 30.2
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 9.7e-20 102.1 310 28.1
Mapoly0120s0017 Marchantia polymorpha HOM05D011080 ORTHO05D000239 2.8e-19 100.5 225 30.2
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 4.8e-19 99.8 315 26.3
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 8.2e-19 99.0 291 27.5
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 1.1e-18 98.6 285 27.7
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.4e-18 98.2 291 27.8
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.8e-18 97.8 333 27.3
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 1.8e-18 97.8 293 28.3
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 1.8e-18 97.8 291 27.5
Mapoly0120s0043 Marchantia polymorpha HOM05D011080 ORTHO05D255325 2.4e-18 97.4 252 30.6
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 3.1e-18 97.1 286 27.3
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 3.1e-18 97.1 300 27.7
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 5.3e-18 96.3 297 26.3
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 5.3e-18 96.3 293 28.0
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 5.3e-18 96.3 293 28.0
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 6.9e-18 95.9 294 26.2
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 6.9e-18 95.9 297 28.6
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.5e-17 94.7 297 27.3
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 1.5e-17 94.7 321 27.1
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 2.6e-17 94.0 321 25.5
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 2.6e-17 94.0 286 27.6
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 2.6e-17 94.0 286 27.6
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 3.4e-17 93.6 321 24.9
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 3.4e-17 93.6 295 27.1
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 4.5e-17 93.2 285 27.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 4.5e-17 93.2 295 27.1
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 4.5e-17 93.2 286 27.6
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 5.9e-17 92.8 286 25.2
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 5.9e-17 92.8 286 25.2
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 5.9e-17 92.8 330 27.0
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 7.7e-17 92.4 289 27.7
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 7.7e-17 92.4 295 26.8
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 7.7e-17 92.4 292 26.0
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 7.7e-17 92.4 286 25.5
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.0e-16 92.0 288 27.4
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.3e-16 91.7 300 27.7
Mapoly0062s0059 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.3e-16 91.7 189 36.0
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.7e-16 91.3 283 26.5
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.2e-16 90.9 288 27.8
Mapoly0053s0003 Marchantia polymorpha HOM05D011080 ORTHO05D255763 2.2e-16 90.9 155 39.4
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 2.2e-16 90.9 292 27.4
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 2.9e-16 90.5 283 27.2
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 6.5e-16 89.4 245 27.3
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 6.5e-16 89.4 304 25.0
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 8.5e-16 89.0 195 31.3
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 8.5e-16 89.0 283 27.2
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 8.5e-16 89.0 290 27.9
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 1.1e-15 88.6 283 26.5
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 1.4e-15 88.2 279 27.6
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.9e-15 87.8 302 26.5
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 2.5e-15 87.4 292 25.3
Mapoly0064s0096 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.2e-15 87.0 230 29.1
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 4.2e-15 86.7 286 25.2
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 1.6e-14 84.7 200 31.5
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 2.7e-14 84.0 283 25.4
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 2.7e-14 84.0 287 27.5
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 3.6e-14 83.6 231 28.6
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 4.7e-14 83.2 228 27.2
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 4.7e-14 83.2 233 26.2
Pp3c9_17530 Physcomitrium patens HOM05D031884 ORTHO05D311885 6.1e-14 82.8 282 28.4
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 7.9e-14 82.4 279 26.5
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 1.0e-13 82.0 304 24.3
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 1.4e-13 81.6 185 29.7
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 1.8e-13 81.3 254 28.0
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 3.0e-13 80.5 174 29.9
Mapoly0016s0166 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.9e-13 80.1 181 32.0
Mapoly0041s0073 Marchantia polymorpha HOM05D011080 ORTHO05D255563 1.1e-12 78.6 291 26.1
Mapoly0120s0039 Marchantia polymorpha HOM05D011080 ORTHO05D252314 1.1e-12 78.6 127 36.2
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 1.1e-12 78.6 224 26.8
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 2.8e-11 73.9 340 23.8
Pp3c2_2170 Physcomitrium patens HOM05D002195 ORTHO05D315015 1.0e-08 65.5 279 26.2
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 6.5e-08 62.8 225 27.6


User provided reference genes

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