Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 4.4e-37 157.5 84 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 5.6e-24 114.0 81 65.4
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 3.6e-23 111.3 82 65.9
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 2.3e-22 108.6 80 68.8
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 4.0e-22 107.8 80 65.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 8.9e-22 106.7 79 64.6
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 1.2e-21 106.3 81 64.2
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.2e-21 106.3 79 62.0
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.5e-21 105.9 80 65.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 1.5e-21 105.9 80 63.8
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 2.6e-21 105.1 80 66.2
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.6e-21 105.1 80 66.2
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 2.6e-21 105.1 80 67.5
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 2.6e-21 105.1 80 62.5
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 2.6e-21 105.1 80 63.8
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 2.6e-21 105.1 77 67.5
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 3.4e-21 104.8 80 65.0
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 4.4e-21 104.4 80 63.8
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.8e-21 104.0 77 66.2
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 5.8e-21 104.0 80 66.2
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 7.5e-21 103.6 77 64.9
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 7.5e-21 103.6 80 62.5
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 7.5e-21 103.6 80 62.5
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 7.5e-21 103.6 80 63.8
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 9.9e-21 103.2 80 62.5
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 9.9e-21 103.2 80 62.5
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 9.9e-21 103.2 80 63.8
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.3e-20 102.8 80 62.5
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 1.3e-20 102.8 80 63.8
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 1.3e-20 102.8 79 64.6
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.3e-20 102.8 80 58.8
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 1.3e-20 102.8 80 60.0
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 1.7e-20 102.4 80 62.5
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.7e-20 102.4 80 63.8
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 2.2e-20 102.1 80 62.5
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.2e-20 102.1 80 62.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.9e-20 101.7 80 60.0
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 60.0
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 65.0
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 65.0
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 62.5
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 61.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 2.9e-20 101.7 80 63.8
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 3.7e-20 101.3 80 61.2
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 3.7e-20 101.3 80 61.2
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 3.7e-20 101.3 80 61.2
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 3.7e-20 101.3 80 61.2
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 3.7e-20 101.3 80 61.2
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 4.9e-20 100.9 80 61.2
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 4.9e-20 100.9 80 60.0
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 4.9e-20 100.9 77 63.6
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 4.9e-20 100.9 80 61.2
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 4.9e-20 100.9 80 60.0
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 6.4e-20 100.5 80 62.5
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 6.4e-20 100.5 80 62.5
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 6.4e-20 100.5 80 61.2
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 6.4e-20 100.5 80 60.0
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 6.4e-20 100.5 80 63.8
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 8.3e-20 100.1 80 57.5
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 8.3e-20 100.1 77 63.6
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 62.5
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 61.2
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 60.0
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 61.2
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 58.8
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 1.1e-19 99.8 80 58.8
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 1.4e-19 99.4 80 57.5
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.4e-19 99.4 80 60.0
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 1.4e-19 99.4 80 58.8
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 1.4e-19 99.4 80 61.2
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.9e-19 99.0 80 58.8
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 1.9e-19 99.0 80 58.8
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 1.9e-19 99.0 80 60.0
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 2.4e-19 98.6 80 60.0
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 2.4e-19 98.6 80 60.0
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.4e-19 98.6 80 61.2
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 2.4e-19 98.6 80 61.2
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 2.4e-19 98.6 80 62.5
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.2e-19 98.2 80 58.8
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 4.1e-19 97.8 80 57.5
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 5.4e-19 97.4 80 55.0
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 5.4e-19 97.4 77 62.3
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 5.4e-19 97.4 80 61.2
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 5.4e-19 97.4 77 61.0
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 7.1e-19 97.1 77 63.6
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.1e-19 97.1 80 57.5
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 9.2e-19 96.7 77 58.4
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 9.2e-19 96.7 82 53.7
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.2e-18 96.3 80 60.0
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.2e-18 96.3 80 56.2
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 1.6e-18 95.9 80 56.2
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.1e-18 95.5 80 57.5
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 3.5e-18 94.7 80 56.2
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 4.6e-18 94.4 80 56.2
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 4.6e-18 94.4 80 56.2
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 6.0e-18 94.0 80 55.0
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 7.8e-18 93.6 79 58.2
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.0e-17 93.2 80 53.8
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.0e-17 93.2 75 62.7
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.3e-17 92.8 80 53.8
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.7e-17 92.4 80 53.8
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.3e-17 92.0 77 55.8
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 6.6e-17 90.5 80 53.8
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.1e-16 89.7 80 55.0
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 2.8e-15 85.1 57 70.2
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 5.8e-13 77.4 64 59.4
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.6e-10 69.3 80 47.5
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.7e-10 68.6 49 63.3
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 7.8e-10 67.0 50 66.0
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.3e-09 66.2 52 59.6
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.3e-09 65.5 77 50.6
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 3.9e-09 64.7 82 47.6
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 1.5e-08 62.8 82 37.8
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 4.3e-08 61.2 49 57.1
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 6.9e-06 53.9 54 50.0


User provided reference genes

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