Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 8.8e-123 443.7 241 100.0
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 1.5e-21 107.5 231 35.9
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.3e-20 104.4 224 35.3
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 8.2e-20 101.7 228 34.2
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.4e-19 100.9 234 34.6
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.4e-19 100.9 225 36.0
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 1.8e-19 100.5 220 31.4
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.3e-19 99.0 219 32.9
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 7.0e-19 98.6 218 33.0
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 7.0e-19 98.6 225 36.9
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.2e-18 97.8 226 35.4
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-18 96.7 219 32.0
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.6e-18 96.7 227 32.6
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 3.5e-18 96.3 226 31.9
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 4.5e-18 95.9 178 38.2
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.5e-18 95.9 227 34.4
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 5.9e-18 95.5 219 32.4
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 7.7e-18 95.1 242 32.6
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.7e-18 95.1 218 32.6
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 7.7e-18 95.1 225 32.0
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.0e-17 94.7 225 32.0
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.3e-17 94.4 227 32.2
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.7e-17 94.0 223 34.1
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.2e-17 93.6 219 32.0
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.2e-17 93.6 222 33.3
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 2.9e-17 93.2 224 32.6
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.9e-17 93.2 230 33.9
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.8e-17 92.8 230 34.8
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 3.8e-17 92.8 230 34.8
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 5.0e-17 92.4 222 31.1
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 6.5e-17 92.0 235 29.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 6.5e-17 92.0 230 33.9
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 8.5e-17 91.7 230 35.2
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.1e-16 91.3 234 32.5
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.1e-16 91.3 229 34.5
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.5e-16 90.9 238 31.1
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.5e-16 90.9 222 34.2
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.5e-16 90.9 230 33.9
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.9e-16 90.5 223 31.8
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.5e-16 90.1 226 31.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 2.5e-16 90.1 224 33.0
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 3.2e-16 89.7 226 32.7
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 3.2e-16 89.7 234 32.1
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.2e-16 89.7 245 33.5
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 4.2e-16 89.4 225 29.8
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.2e-16 89.4 231 29.9
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 4.2e-16 89.4 221 32.6
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.2e-15 87.8 238 30.7
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 2.7e-15 86.7 222 31.5
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.6e-15 86.3 240 29.6
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 3.6e-15 86.3 223 32.7
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 4.7e-15 85.9 234 33.3
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.7e-15 85.9 225 34.7
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 4.7e-15 85.9 222 33.8
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 6.1e-15 85.5 231 32.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 6.1e-15 85.5 225 32.0
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 6.1e-15 85.5 228 33.3
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 8.0e-15 85.1 224 30.8
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 8.0e-15 85.1 225 31.1
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.0e-14 84.7 228 31.6
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.4e-14 84.3 220 30.9
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.3e-14 83.6 235 31.5
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.3e-14 83.6 229 33.2
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 3.0e-14 83.2 234 29.9
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.0e-14 82.8 223 30.9
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 4.0e-14 82.8 225 30.7
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 4.0e-14 82.8 169 31.4
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 8.8e-14 81.6 228 30.7
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 8.8e-14 81.6 222 32.4
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 8.8e-14 81.6 159 38.4
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 8.8e-14 81.6 234 29.9
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.5e-13 80.9 162 32.7
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.0e-13 80.5 236 32.2
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 2.0e-13 80.5 225 31.1
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 3.3e-13 79.7 234 31.6
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 4.4e-13 79.3 135 37.8
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 5.7e-13 79.0 236 31.4
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.7e-12 77.4 228 30.7
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.7e-12 77.4 247 27.9
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 2.8e-12 76.6 183 35.0
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 2.8e-12 76.6 226 31.4
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.8e-12 76.6 233 28.8
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.7e-12 76.3 135 35.6
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 4.8e-12 75.9 241 29.9
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.1e-11 74.7 224 31.7
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.1e-11 74.7 227 31.3
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 1.1e-11 74.7 237 30.4
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.1e-11 74.7 226 29.6
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.4e-11 74.3 223 29.1
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.4e-11 74.3 166 33.7
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 2.4e-11 73.6 134 35.1
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 2.4e-11 73.6 226 31.0
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 4.1e-11 72.8 243 29.2
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 5.3e-11 72.4 231 30.3
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 7.0e-11 72.0 221 29.4
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.6e-10 70.9 133 37.6
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.7e-10 70.1 78 47.4
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 2.7e-10 70.1 235 30.2
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.7e-10 70.1 226 28.8
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 4.5e-10 69.3 232 28.9
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 3.8e-09 66.2 143 31.5
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 9.4e-08 61.6 229 27.1
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 1.2e-07 61.2 111 35.1
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.6e-07 60.8 139 32.4
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 4.7e-07 59.3 111 34.2
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 1.0e-06 58.2 75 37.3
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.4e-06 57.8 54 50.0
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.8e-06 57.4 146 32.2
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 4.0e-06 56.2 232 28.0
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 5.2e-06 55.8 248 27.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 8.8e-06 55.1 129 33.3


User provided reference genes

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